Lactobacillus taiwanensis: H1A07_05260
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Entry
H1A07_05260 CDS
T07177
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lta
Lactobacillus taiwanensis
Brite
KEGG Orthology (KO) [BR:
lta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lta03016
]
H1A07_05260 (rnz)
Enzymes [BR:
lta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
H1A07_05260 (rnz)
Transfer RNA biogenesis [BR:
lta03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
H1A07_05260 (rnz)
Prokaryotic type
H1A07_05260 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
QTQ39273
LinkDB
All DBs
Position
complement(1098696..1099625)
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AA seq
309 aa
AA seq
DB search
MEIQFLGTSAGQPSKSRNVSCTALKLLDELNEIWLFDVGEATQHQILDTNIRPRKVTRIF
ISHTHGDHIFGLPGFLSSRSFQGDGGPLTIYGPAGIEQFVQTSLRVSKTHVSYPIKYVVL
KEDGLIFENDIFAVYTARLDHRVPSFGFRVVEKPRSGELLMDKVAEYNVPNGPLLGQLKA
GKIITLSNGQKLDGHDFLGKERPGRIVTIIYDTRPTKNIGELVENADVLVHEATFSGEEE
KMAHRYFHSTCVDAARVARDHNVGQLYLTHISARYTGKAGRQLEHEAKKIFKHTKLANDL
DSFEITLRG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atggaaatacaatttttaggaacaagtgcaggacagccttcaaaaagcagaaatgtttct
tgtactgcacttaaattattagatgaattaaatgaaatatggctttttgatgtaggagaa
gcaacgcaacatcaaattttagatactaatattaggcctagaaaagtaacacgaattttc
atttcacatactcatggtgaccatatttttgggttacctggttttctttcatctcgatct
tttcaaggggatgggggaccattaacaatctatggacctgcaggtattgagcaatttgtt
cagacttctttaagagtttcaaaaactcatgtttcttacccaattaaatatgtagtttta
aaagaagatggtctaatttttgaaaatgatatttttgcagtttatactgctcgtcttgac
caccgtgtacctagttttggctttcgtgtagttgaaaagccacgttctggtgaactattg
atggataaggtagcagaatataacgtgccaaatggtccacttttaggtcaattaaaagct
ggtaagataattacattaagcaatggtcaaaaattagatggacacgattttttgggtaag
gaacgtccaggtcgaattgttacaattatttatgacacgcgcccaacgaaaaatattgga
gaattagtagaaaatgcagatgttttagtacatgaagcgacatttagtggcgaggaagaa
aagatggctcatcgctatttccattctacttgcgttgatgcagctcgtgtggcacgtgat
cacaatgtaggtcagctttatttaacacatatttctgctcgctatactggaaaagccggg
agacaactagaacacgaagcaaaaaaaatatttaagcatactaaattagcgaatgattta
gatagttttgaaattacgttgaggggataa
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