KEGG   Lactobacillus taiwanensis: H1A07_06715
Entry
H1A07_06715       CDS       T07177                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lta  Lactobacillus taiwanensis
Pathway
lta03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lta00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    H1A07_06715 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lta03019]
    H1A07_06715 (rny)
Messenger RNA biogenesis [BR:lta03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     H1A07_06715 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B
Other DBs
NCBI-ProteinID: QTQ39548
LinkDB
Position
complement(1383713..1385335)
AA seq 540 aa
MINTILVPVAVAIISVFVGGCAGYSIRKNKWETQAQNAAHDAKHILADAESKAKAVEADL
ASQKEAMKKAAADAKKEKILEAQEEIHHYRERVDNELNERRQEVSRQENRLLQREDAIDH
KDSLLDQKDSQLTQKENQIKKLQAHVLEKEKRANQLIIEREQKLYEVAELNQEDAKKIVL
DKLSDQLVKERAEMIEESNQLAQAKADHFARKVIIDAIQSSAADTVSEKTVSVVNLPSDD
MKGRIIGREGRNIRSFEALTGVDVIIDDTPDVVVLSGFDPIRREIAKRALERLIKDGRIH
PARIEEMVDRARKEVNDDIYEAGESALMELGIHKMHPELVKILGRLKYRTSYGQNVLSHS
IEVGKLTGVMAAELGLDEKIAVRAGLLHDIGKSIDHEIEGSHVEIGVELARKYHEPDLVV
NAIAAHHDDVPKLSFIAELVVAADTISSARPGARSESLENYIRRLEQLETIAKGHIGVKQ
AYAIQAGREIRVMVEPDKISDARTTILAHDIRNQIEQDMEYPGNIKVTVIREKRAVAIAK
NT seq 1623 nt   +upstreamnt  +downstreamnt
atgataaatacaattttagttcctgttgctgtcgctattatttctgtctttgttggaggt
tgtgctggttatagtatccgtaagaataaatgggaaactcaagcacaaaatgcagctcat
gatgcaaaacacatcttggcagatgcggaaagtaaggctaaagctgttgaagctgatctt
gcttcacaaaaagaagcaatgaagaaggctgcggctgatgcaaagaaagaaaaaatcttg
gaggcacaagaagaaattcatcattatcgcgaaagagtagataatgaacttaatgagcgt
cgacaagaagtttctagacaagagaatcgcttgctgcaacgtgaagatgcaattgatcat
aaagatagtctgctggatcaaaaagattcccagctcacacaaaaagaaaaccaaattaaa
aaattgcaggctcacgtcttggaaaaagaaaagagagccaatcagttaattattgaacgt
gagcagaagctctatgaagttgcagagttaaatcaagaagatgctaaaaagattgtttta
gataaactttcagatcaattagtgaaagaaagagctgaaatgattgaagaaagtaatcaa
cttgctcaagcaaaagccgatcattttgctcgtaaagtaattattgatgcaattcaaagt
agtgcagcagatacagtttctgaaaagactgtctcagttgttaatttgccaagcgatgat
atgaaaggacgtatcattggtcgtgagggtagaaatattcgttcttttgaagcattaact
ggtgtagatgtaatcattgatgatactccagatgtagttgtcttaagtggttttgaccca
attagacgagaaattgccaaaagagcattggagcgtctaattaaagatggccgaattcat
cccgcacgaattgaagagatggttgatcgagctcgtaaagaagtaaatgatgatatttac
gaagccggtgaaagtgccttgatggaacttggcattcataagatgcatccagaattagta
aagattttgggccgattgaaatatcgtacttcttatggacaaaatgttttgtcacactct
attgaagtaggtaaattaacaggtgtaatggctgctgaacttggtttagacgaaaaaata
gcggtacgcgcaggattattacacgatattgggaagtctattgatcatgagatcgaaggc
tcccacgtagaaattggtgttgaacttgcacgcaagtatcatgaaccagatttggttgtg
aatgcaattgctgctcaccacgacgatgttccaaaattatcatttattgcggaattagtg
gtagctgctgatacaatttcctcagctcgtccaggtgctagaagcgaatctttagagaat
tatattcgtagattagagcaactagagaccatagcgaaaggccatattggtgttaagcaa
gcatatgcaattcaagcaggccgtgagataagagtaatggttgagccagataaaatttct
gacgctcgaactactattttggctcatgacattagaaatcaaatcgaacaagatatggaa
tatcctggtaacattaaagttacagttattcgagaaaaacgtgctgttgcaatagctaaa
taa

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