Leptotrichia trevisanii: JMUB4039_0428
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Entry
JMUB4039_0428 CDS
T06733
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
JMUB4039_0428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lte03021
]
JMUB4039_0428
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_0428
Enzymes [BR:
lte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
JMUB4039_0428
Transcription machinery [BR:
lte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
JMUB4039_0428
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
JMUB4039_0428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BBM56461
LinkDB
All DBs
Position
475088..476062
Genome browser
AA seq
324 aa
AA seq
DB search
MLNIEKIAKNVRLTEEKEDNYTAKYTLEPLYRGYGNTIGNALRRILLSSIPGTAIKGIKI
EGVLNEFSTIEGVKEAVTDIILNVKEIVVEADEPGEKKMTLSVKGPAVITAADIQVEPGL
RVINPEQVIMTVTTDKQIDIEFLVDSGEGFVVSDEINTDGWPIGYLAVDAIYTPIKRVNY
SVEDTMVGRVTNYDKLILEIATDGSIEIKDALSYAVELLTWHLEPFTNIGNSMSKYRDSE
DELTETDAENENNIEDMKIEELDFTVRSYNCLKKAGVNTISDLTSMTYNELLKIKNLGKK
SLNEIIDKMKELGYDLGDNPSNDE
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttgttaaatattgaaaaaatagctaaaaatgtaagattaactgaagaaaaagaagataat
tatacagcaaagtacacactagagcctctatacagaggatatggaaatactattggaaat
gcacttagaagaatattattatcatcaattccagggactgcaataaaaggaattaaaatt
gaaggtgtgctaaatgaattttctacaattgagggcgtaaaagaagcagttacagacatt
attttgaacgtaaaggaaatagtagttgaagctgatgaacctggtgaaaagaaaatgaca
ctttcagtaaaagggccagctgtaattacagcagcagatattcaagtagaaccgggattg
agggttataaatcctgagcaggttattatgacagtaacaactgataaacagattgacata
gaattccttgttgattctggagaaggatttgtagtttctgatgaaattaatacggatgga
tggccaataggatatttagcagttgatgcaatttatacacctattaaaagagtaaattat
agtgttgaagatactatggttggacgtgttacaaactatgacaaattaattttggaaatt
gcaacagatggaagtatcgaaattaaagatgctttatcttatgcagtagagttattaact
tggcatttggaaccatttacaaatattggaaacagtatgagtaaatacagagatagtgaa
gatgaattgacagaaactgatgctgaaaatgaaaataacattgaagatatgaaaatcgaa
gagcttgactttacagtacgttcttataactgcttgaagaaagcgggagtaaatacaatt
tcagatttaacttcaatgacttataatgaattattgaaaattaagaatttagggaagaaa
tcgctaaatgaaattattgataaaatgaaggaacttggttacgatttaggtgataatcca
agtaatgatgaataa
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