Leptotrichia trevisanii: JMUB4039_0552
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Entry
JMUB4039_0552 CDS
T06733
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03030
DNA replication
lte03430
Mismatch repair
lte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMUB4039_0552
03430 Mismatch repair
JMUB4039_0552
03440 Homologous recombination
JMUB4039_0552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lte03032
]
JMUB4039_0552
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_0552
Enzymes [BR:
lte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMUB4039_0552
DNA replication proteins [BR:
lte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMUB4039_0552
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMUB4039_0552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BBM56577
LinkDB
All DBs
Position
591220..594777
Genome browser
AA seq
1185 aa
AA seq
DB search
MGNKFVHLKLHTEYSLLEGVGKIDEYVGRAKEIGAKALAITDTSMFGVIEFFKKCKNAGI
KPIIGLEVFLDGLEKVGEFSLTLLAKNQNGYKNLSKLSSISYSRFTRNRNKIKYDELKKY
SDDLYILSGGINSEVVKGILDLENTQVRRVIEKLGKDFGDNFFIEVPAVERLEKARKMLF
DIVRKNKFDNFVITNDVYYSNRKDAVLQKIVELIKEGSKIDTEKSENSEILYDDLYLKSE
NEIEKSFENKEYSEFYETGINNVEKIVENCSVDFEFHHFKFPKYSLPQNVSEKEFLRNLV
FEGLFHKYLKKSVSDSEKLQLDKNFEIIEKEIAKDEIAGKKLKEVKIREELLKNNLENVL
ERAEYELEIIDKMGYNGYFIIVWDFIKFSRENGVYVGPGRGSAAGSIVSYALNITEIDPL
EYNLIFERFLNPERISMPDIDIDFDQEQREIVINYVVNKYGAEYVAHIITFGTLKARLAI
RDVGRVLNVSLVKVDKIAKMIPFNTELRDALNNIPEIRKMYETDREIKRVIDYSLKLEGK
VRHASVHAAGVVISKDVLSDEIPTYSDGKTKIVSTQYQMKELEELGILKMDFLGLKNLTI
LRKTVENIEKRKKTKIVLNDIPLNDEKTYELLTKADTMGVFQCESAGIRSLMKKMKIEKF
EDIIALLALYRPGPLRSGMVDDFINVKNNRTEIKYIDNSLKYILEETYGIILYQEQVMKI
VSEMANYSLGEADELRRAIGKKNPELMKKNREKFVTNAEKNGVLSKKANEIYDLVEKFGG
YGFNKSHSAAYALIVYWTAYFKANYPLEFFAAIMTTEVHNLDRFVVFVNEAKEKGINIFL
PDVNLSDYDFKIEENQADKENFGKVGIRFGLFAIKGVGAALINEIKKERKNGKFVSYKDF
GYRMKQNGITKKQLESLILSGALDGVDGNRFEKYRSIDKLLEYSQKKYESEEDLQMILFG
GKKEISVDFQMEKSDEFPQKVLLQNEKEYLGIYVSSHPLNEKKNLINIISHNKISEISQK
ELKKVRIIGIVKNVKKFATRAGKEPMVKFEMEDFQKSIEVVCFPREYITFGYKITEGQIM
VLEGIVNSEQNKNTVILNNICNIENLEENKNLKLYILIDEEVKEKNQELKQIILKNKGDN
QVFLAFKTNEKKEVVKLSEKYNVNLSLKFIRKVAKLVGIERIKLK
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgggaaataaatttgtacatttgaaattgcatacggagtattcactgcttgaaggtgtt
gggaagattgatgaatatgttggaagagctaaggaaattggggcaaaagcacttgcaatt
acggatacttcgatgtttggggtgattgagttttttaagaagtgtaaaaatgctggaata
aagccgattattggacttgaggtgtttctggatgggctggagaaagtaggggagttttcg
cttactttgcttgctaaaaatcagaatgggtataaaaatttgtctaagttgtcatcaatt
tcatatagcaggtttacacggaatcggaataaaattaagtatgatgaattgaaaaaatat
tcagatgatttgtatattttgtcgggcgggataaatagtgaagttgtaaagggtattctg
gatttggaaaatactcaggttagaagggttattgaaaaacttggtaaggattttggggat
aatttttttattgaagttcctgctgtggaaaggctggaaaaggctaggaaaatgcttttt
gacattgtgcgtaaaaataaatttgataattttgttattacaaacgacgtttattattca
aatagaaaagatgcagttttgcagaaaattgtggaattaataaaagagggaagcaaaatt
gatacagaaaaatcggaaaatagtgaaattttgtatgatgatttatatctaaaatctgaa
aatgaaatagaaaaaagttttgaaaataaggaatatagtgaattttatgaaactggaatt
aacaatgtggaaaaaattgtggaaaactgcagtgttgattttgagtttcatcattttaaa
tttccgaaatattcgttgccacaaaatgtaagtgaaaaggagtttttacgaaatctagta
tttgagggactttttcataaatatctgaaaaaatctgtttcagattctgaaaaattacag
ctggataaaaattttgagataatagaaaaagagattgcaaaagatgaaattgctggaaag
aaattgaaagaagttaaaattcgtgaagaattattaaagaataatttggaaaatgttttg
gagcgtgcagagtatgagctggaaattattgataaaatgggatacaatggatattttatc
attgtctgggattttataaaattctcacgtgaaaatggggtttatgttgggcctggaagg
ggttctgcggctggaagcattgtatcatatgctttgaatattacggaaattgatccactt
gaatataacttgatttttgaacgttttttgaatcctgaacgtatttcgatgcctgatatt
gacatagattttgatcaggaacagcgggaaattgttataaattatgtggtaaataaatat
ggggcagagtatgtggcacatattattacgtttggaacgctaaaggctaggcttgcaatt
cgtgatgtgggacgtgtgttaaatgtttcgcttgtgaaagtcgataaaatcgctaaaatg
ataccgtttaatacagaactaagagatgccttgaacaatatccctgaaattagaaaaatg
tatgaaactgacagggaaataaaaagggtaattgattattcgcttaaattggaaggaaaa
gtacgtcacgcctctgttcatgcagctggagtcgttatttccaaagatgtgctaagtgat
gagattccgacttattctgatgggaaaacaaagattgtttcgacacagtatcagatgaag
gaactggaagagttgggaattttaaaaatggattttcttggcttgaaaaatcttacaatt
ttgcgaaaaactgtggaaaatattgagaaaagaaaaaaaacaaagattgtattaaatgat
attcctctaaatgatgaaaaaacgtatgaattgcttacaaaggctgatacaatgggagtt
ttccaatgtgagtcggctggaattagaagccttatgaaaaaaatgaaaattgaaaaattt
gaagatataatagctcttttggcactttatcgtccagggcctttgcgaagtggaatggtg
gatgattttatcaatgtgaaaaataacaggactgagataaaatacattgataactcgcta
aaatacatacttgaggaaacttacgggataattttgtatcaggagcaggttatgaaaatt
gtgagtgaaatggcaaattattcacttggagaagctgatgagctacggcgtgcgattgga
aagaaaaatcctgaactaatgaagaaaaatcgtgaaaaatttgtaacaaatgctgaaaaa
aacggagttttgtcgaaaaaggcaaacgaaatttatgatttagtggaaaaatttggtgga
tatggatttaacaagtcacattcggcagcttacgccctgattgtttactggacagcgtat
tttaaggcaaattatccattggaattttttgctgcgataatgacaaccgaagtgcataat
ctggacagatttgttgtttttgtaaatgaagcgaaggaaaaagggattaatatatttttg
ccagatgtaaatttgtctgattatgattttaaaattgaagaaaatcaggcggataaagaa
aattttggaaaggttggaataagatttgggctttttgcgataaagggcgtgggagcagct
ttaattaatgaaataaaaaaagaacgaaaaaatggaaagtttgtttcctataaagatttt
ggatatcggatgaagcaaaacggaattacaaaaaaacagctggaatcgctaattttatcg
ggagcattggatggagttgatggaaacaggtttgaaaaatacagatccattgataaactt
ctggaatacagccagaaaaaatacgaatctgaagaagatttgcaaatgattttatttgga
ggaaaaaaggagatatcagttgacttccagatggaaaaaagcgatgaatttcctcaaaaa
gttttgcttcaaaacgaaaaggaatatttgggaatctacgtttcaagccatcctttaaat
gagaaaaaaaatctgataaatataatttcccataataaaatatcagaaatttctcaaaaa
gagctaaaaaaagtacgaattatcggaatagtaaaaaatgtaaaaaaatttgcaacacgg
gctggaaaagagccaatggtaaaatttgaaatggaagattttcaaaaaagtattgaagtt
gtctgttttccaagagaatacataacttttggctataaaatcacggaagggcagattatg
gtgctggaaggaattgtaaattccgagcaaaataaaaatacagtaattttaaacaacatt
tgcaacattgaaaatctagaagaaaataaaaatctaaaattatacatcttaattgacgaa
gaagtgaaagaaaagaatcaggaattgaagcagattattttaaaaaataaaggtgacaat
caagtatttttggcatttaaaacgaacgagaaaaaagaagttgtaaaactgtctgaaaaa
tataatgtgaacttgtcgctcaagtttattaggaaagttgcgaaattggtgggaattgag
agaataaagttgaaatga
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