Leptotrichia trevisanii: JMUB4039_0601
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Entry
JMUB4039_0601 CDS
T06733
Symbol
polC
Name
(GenBank) DNA polymerase III subunit alpha
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03030
DNA replication
lte03430
Mismatch repair
lte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JMUB4039_0601 (polC)
03430 Mismatch repair
JMUB4039_0601 (polC)
03440 Homologous recombination
JMUB4039_0601 (polC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lte03032
]
JMUB4039_0601 (polC)
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_0601 (polC)
Enzymes [BR:
lte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JMUB4039_0601 (polC)
DNA replication proteins [BR:
lte03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JMUB4039_0601 (polC)
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JMUB4039_0601 (polC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
DNA_pol3_finger
PHP
HHH_6
RNase_H_2
Rv2179c-like
tRNA_anti-codon
DNA_pol_A_exo1
HHH_3
DUF1980_C
DNA_pol3_a_NI
DEDDh_C
Zn-ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BBM56623
UniProt:
A0A510L2D2
LinkDB
All DBs
Position
644973..649370
Genome browser
AA seq
1465 aa
AA seq
DB search
MSTKYLKVKPSEDFFRKYGIKNFEIEYVNLFSRKREMEIFIKVNSLVAHSEIQDLRQLLY
KSFENGLKLKIKMDVNPELIQKDVVGFVKFAIENYKHESKRYQYIFASYEVESLENTVFI
KLPSHHLIEEARRTEAKEELTRKIYECMDNSIKIEFVNGDFEEVKAKIKAQNELNSVKAS
ELPKYENVSMSNGNGNHYGGNGNFNNGNNGNGYSNGGNANGGNNKGNYKWKKIPDIDAMP
FSTLDILNNGDDVALEGKIFNVDMKETKNGKLMCDFMITDYTDSVSCRIFFNTDEDIQVK
LGEWVKVTGSFEADMYSGEKYVRTQRVEAIESKDVKKEDNAPKKRIELHAHTNMSEMSGV
MSIKDYAKRAKEFGHSGIAVTDYGVVHSFPFAFKEANEDFKVIFGMEAYVVDDEQDLITN
PKDKMIEDEIYVVFDIETTGFDPFNDKIIEIGAVKMRGREIIGEFSEFVNPEIPIPPKIT
ELTTITDEMVANAEKIETVLPRFLEFCTDTTVVAHNAKFDVGFIKQKTIEQGLEYSPSVI
DTLPLARTLLPDSRGYGLANLVKYFGITLETHHRAVDDAKATAEVFQKFLNMILSKGILK
LIEINTDLQPNIQNSETLNTMILVKNQAGLRDLYELVSRSNIEFFGMRRPRIPKTLLNSM
RENLLIASSASASERNKGELVNLYLRGAEKDDIEEKARFYDYIEIQPHTNYADMVERTSK
EIESYDIIKEMNKYFYELGKSQNKIVVATGDTHYLEEREAINRNVLLLGSGTMWKTETSE
GVRGYEFFDRKLYFKTTEEMLESFNYLGEEAAQEVVVENTHKINDMIEQVRPIPTGFYPP
KIDGAEDEVREMTYKKLEELYGENIDESLKERVEKELNSIIQNGFAVLYLIAQKLVHKSV
DAGYLVGSRGSVGSSIVAYLMGITEVNGLYPHYRCPKCKHTEFMNEEGSGVDYPDKNCPE
CGTKYIKDGHAIPFEVFMGFNGDKVPDIDLNFSGEYQGEIHKYTEELFGSDNVFRAGTIS
TLAEKNAFGYVKKYLEEVEGTPEIKERKAEVMRIAKGCEGARKTTGQHPGGMIVVPKDKS
IYDFCPIQRPANDMKSASKTTHFDYHVMDEQLVKLDILGHDDPTTLRILQDLTGVDIYTI
PLDDKEVMSLFSGTEALGVTPDEIGSPTGTSGIPEFGTSFVKQMLVDTRPKTFAELVRIS
GLSHGTDVWLNNAQDYVRSGIATLSQIITVRDDIMNKLIDDGLDKSLAFSIMEFVRKGQP
TKNREKWHEYSKTMKEHGVEQWYIDSCEKIKYMFPKGHAVAYVMMAVRIAYFKVHYPIEF
YTAFLNRKVGDFKMTTMFRPVEELKRAKMEMDRKGNLNAKEKQELFLYEILIEMHYRKIE
LEQIDIYKSEAKLFTIQDGKIRMPLIAMDGLGDAVAENIVSERQVDFLSIEDLVKRTKLN
KTIVELMKEYGCLKDLSATNQQTLF
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atgagtacgaagtatttgaaggttaagccatcagaagatttttttagaaaatatggaatt
aagaattttgagattgagtatgttaatctgttttctaggaaaagggaaatggagatattt
ataaaagtgaatagtctggttgcgcatagtgagatacaggacttgaggcagctgctttat
aagagttttgaaaatgggttgaaattgaagattaagatggatgttaatcctgagctgata
cagaaggatgttgttgggtttgtaaaatttgcgattgagaattataagcatgagagcaag
agatatcagtatatttttgcaagttatgaagtggaaagtttggaaaatacggtgtttata
aaattaccatcacaccatttgatagaagaggcaagacgaactgaggcaaaggaagaactt
acaagaaaaatttatgaatgtatggataattcgataaaaattgagtttgtaaatggggat
tttgaggaagtgaaggctaaaattaaggctcaaaatgaattaaattcggtaaaggcaagt
gaacttccaaagtatgaaaatgttagtatgagcaatggtaatggaaatcattacggagga
aacggaaattttaataacggaaataacggaaacggttattcaaatggtgggaatgctaat
ggaggcaacaataaaggtaattacaaatggaaaaaaattcctgatatagatgcaatgcca
ttttctacacttgatattttgaacaatggtgatgatgtagcactagaaggaaaaattttt
aatgtagatatgaaggaaactaagaatggtaagttaatgtgtgattttatgatcacagat
tatacagattctgttagttgtagaatattctttaatacagatgaggatattcaggtaaaa
cttggggaatgggtaaaggttactggaagttttgaggcagatatgtatagtggggaaaaa
tatgtcagaacgcaaagagtggaagctattgaatctaaagatgtgaaaaaagaagacaat
gctccaaaaaaaagaatagaacttcatgcacatacgaatatgagtgaaatgagtggagtt
atgtcaatcaaagattatgcaaaaagggctaaagaatttgggcatagtgggattgctgtg
acagattacggagtagtacattcatttccgtttgcgtttaaggaggcaaatgaggatttt
aaagttatttttgggatggaggcgtatgtagtcgatgatgagcaggacttgattaccaat
cctaaggataagatgattgaagatgaaatttatgttgtattcgatattgaaacgacggga
tttgatccgtttaatgacaaaataattgaaattggggctgtgaaaatgcgtggaagggaa
attattggagaattttctgaatttgtaaatcctgaaattccaattccgccaaagataaca
gaacttacaacgattactgatgaaatggtcgcaaatgctgaaaaaatagaaactgtactt
ccaagatttctagaattttgtaccgatacaacggtagttgcccacaatgcgaaatttgac
gtgggatttatcaagcaaaaaactattgagcaagggcttgagtattctccgagcgtaatt
gatacgttgcctttggctagaacattgcttcctgattcgagaggatatggacttgctaat
ttggtaaaatattttggaattacacttgaaacacaccatagggctgttgatgatgcaaag
gctactgcggaagtttttcagaaatttttaaatatgattttaagtaaagggattttaaaa
ctgattgagattaatacggatttacagccaaatattcaaaattctgaaacattgaacact
atgattctggtaaaaaatcaggctgggcttcgtgacctttacgaacttgtatcacgttcc
aacatagaattttttggaatgagaagacctagaataccaaaaactttgttaaacagcatg
agggaaaatctgttaattgcaagttctgcttccgcttctgaaagaaataagggagaactt
gtaaatctttatttacgtggagcggaaaaagatgacattgaggaaaaagcgagattttat
gattatatcgaaattcagccacacacaaattatgctgatatggtggaaagaacgagcaag
gaaattgaaagttacgatataataaaggaaatgaacaagtatttttatgaacttggaaaa
agtcagaataaaattgtagttgcgacaggagatacccattatcttgaagagcgtgaagca
attaacaggaatgttcttcttttgggaagtggaacgatgtggaaaactgaaacttcagaa
ggtgtgagaggatacgagttttttgatagaaaattgtattttaaaactaccgaagaaatg
ttggagtcgtttaattatctgggagaagaagcggctcaggaagtcgttgtggaaaatact
cataaaatcaatgatatgatagagcaggttcgtccaatcccaactggattctatccgccg
aaaattgacggggcagaagatgaagtaagggaaatgacttataagaaacttgaggaactt
tatggggaaaacattgatgagagcctgaaggaaagagtggaaaaggagcttaattcgatt
attcaaaatggatttgcggtgctttatctgattgcacagaaacttgtgcataaatcggtg
gacgcaggttatcttgtaggttcacgtggttcggttggatcttcaatagttgcctatctt
atgggaattaccgaagtgaatggactttatccgcactacagatgtccgaaatgtaagcat
acggaatttatgaacgaggaaggaagtggagttgactatcctgacaaaaattgtccagaa
tgtggtacaaaatatataaaagatggacacgccatcccatttgaagtgtttatgggattt
aacggagataaagtgccagatattgacttgaacttttccggggaatatcaaggggagatt
cataaatatacggaagagctgtttggaagtgacaatgtctttcgtgctggaacaatttct
acacttgctgaaaagaatgcttttgggtatgtgaaaaaatatcttgaagaagtggaagga
acgcctgaaataaaggaaagaaaagcagaagttatgagaattgcaaaaggctgtgaaggg
gctagaaaaactactggacagcatcctggcggaatgatagtcgttccaaaggacaagtca
atttacgatttctgtccaatccagcgtccagcaaatgatatgaaatcagcttccaagaca
acccattttgattatcacgtaatggacgaacagcttgtaaaactggatatactgggacac
gacgatccgacaacgcttagaattttacaggatttgacaggtgttgatatttatacgatt
ccgcttgatgataaggaagtaatgagtttattcagcggtacagaggcacttggtgtaact
ccagatgaaatcggttctccaacaggtacatcaggaatacccgaatttggtacatctttc
gtaaaacagatgctagttgacacacgtccaaaaacctttgcggaattagtcagaatttct
ggactttcacatggaacggacgtttggctgaataatgcacaggactacgtaagaagtgga
attgcaaccttgagtcaaattatcacggtgcgggatgacattatgaataaactgattgac
gatggacttgataaatcattagccttttcaataatggaatttgtcagaaaaggacagcct
actaaaaatcgtgaaaagtggcatgaatattctaaaacaatgaaagaacacggtgtagag
caatggtacattgattcatgcgaaaaaataaaatatatgtttccgaaaggacacgctgtg
gcttatgtaatgatggcagtaagaatcgcttattttaaagtccactatccaatcgaattt
tacacagctttcctaaatagaaaagtcggagattttaaaatgacgacaatgttcagacca
gtagaagaattgaaacgtgcgaaaatggaaatggacagaaaaggaaacttaaacgctaaa
gaaaagcaggaattattcctatacgaaattttgattgaaatgcactaccgtaaaatcgaa
ctggaacaaattgacatctataaatcagaagcaaaacttttcacaatacaggacggcaaa
atcagaatgccattaatcgcaatggatggactaggagatgctgttgctgaaaatattgtt
tctgaacgacaagttgactttttatcaatcgaggatttagtaaaacgtacaaaattgaat
aaaacgattgtggaactgatgaaggaatatggatgtttgaaggatttgtcagcaacaaat
cagcagacattattttag
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integrated database retrieval system
