Leptotrichia trevisanii: JMUB4039_0970
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Entry
JMUB4039_0970 CDS
T06733
Name
(GenBank) tRNA pseudouridine synthase-like protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lte
Leptotrichia trevisanii
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lte03016
]
JMUB4039_0970
Enzymes [BR:
lte01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
JMUB4039_0970
Transfer RNA biogenesis [BR:
lte03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JMUB4039_0970
Prokaryotic type
JMUB4039_0970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
NAS
KH_KhpA-B
KH_1
KH_2
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-ProteinID:
BBM56992
LinkDB
All DBs
Position
1041609..1042631
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AA seq
340 aa
AA seq
DB search
MEKIDTEKTKMDKLIRDFENTKYFGYMFFVEYDGQKFESFDENPNKKSVKSEFRKILENN
KIKIFKGIQQAGRTDANVSAKENILYINSKEIIDFLKLKFLETEGLKINKIVRTLPFLEF
PQMIEKRYYIYEYPKKLKKNDEDRINQICKKISGKKDFYEFTSEKGKKLKNYTREIFVKY
ENNKLYFVGDGFLPQQVRIMSNFILNNTKFDIEKLNDENFENRKLGIKDKSLDGKYLTLV
KVDFSEELEKISFFDVKNIEELINLRNENNRSLEIRNSENKIDNLNEELKSIGKVRKIEK
NSYFTLFFVEKKDKGEFIGKRGKNIRKLKRIFGDIVVKEI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaattgatacggagaagacaaaaatggataaattgataagagattttgaaaat
acaaaatattttggatatatgttttttgtggaatatgatggacagaaatttgaatctttt
gatgaaaatcctaataaaaagagtgttaaatcagaattcagaaaaattttggaaaataac
aaaatcaagatttttaaaggtattcagcaggctggaaggactgatgcaaatgtgagtgca
aaagaaaatattctttatataaattccaaagagataattgattttttaaaattaaaattt
ttggaaacagaaggactgaaaatcaataaaatagtgagaacattgccatttcttgaattt
ccacaaatgattgaaaaaagatattatatttatgaatatccaaaaaaacttaagaaaaac
gatgaagatagaataaatcagatttgtaagaaaatatctgggaaaaaggatttttacgaa
tttacttcggaaaaggggaaaaaattaaaaaattatacaagagaaatttttgtgaaatat
gaaaataataaactgtattttgtgggagatggatttttgccacagcaggtgcggattatg
agcaattttattttaaataatacaaagtttgatattgaaaagttaaatgatgagaatttt
gaaaacaggaaattggggataaaagataaatcactggatgggaaatatttgacacttgtg
aaagttgacttttcagaggaattggagaaaatcagtttttttgatgtaaaaaatattgaa
gaattgataaatttgagaaatgaaaataatagaagtttggaaataagaaattctgaaaat
aaaatagacaatttgaatgaagaattaaaaagtataggtaaagttagaaaaattgagaaa
aatagttattttacgttattttttgttgaaaagaaagataaaggagaatttattgggaaa
agagggaaaaatattaggaagttaaagaggatttttggagatatagttgtaaaagagatt
tga
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