Leptotrichia trevisanii: JMUB4039_1206
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Entry
JMUB4039_1206 CDS
T06733
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03410
Base excision repair
lte03430
Mismatch repair
lte03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JMUB4039_1206
03430 Mismatch repair
JMUB4039_1206
03440 Homologous recombination
JMUB4039_1206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_1206
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
JMUB4039_1206
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JMUB4039_1206
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
JMUB4039_1206
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
BBM57228
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All DBs
Position
1303799..1305496
Genome browser
AA seq
565 aa
AA seq
DB search
MKWELKSYNEDYLTSKSSEFGESRLISRLLLNREINTKEKVSKFLNSDKGDIHNPFLFEN
MEKVVERIKKAGRNKEKIVIYGDYDVDGISGVAYLVIMLRKLGLNVDYYIPNRVHEGIGI
NKNLLNFLKKRDAKLFITVDISINNREEILMLKNSGIDIIITDHHRQIGVLEDKEQEKEL
GILTINPKTSETYPNKSLSGSGVAFKLADAVYERYGVNKKILYDYMDIIMIGTVADVVPM
TDENRFIIKKGLNNLKKTKIKGLKYIINYLKINPRNITTSDIGFFIAPIFNALGRIDNSK
IVVNFFIQEDDFKLFSIIEEMKRANKIRRYLENEIYNELEEKIQRLERPKYIFMKSRKWH
SGVIGVVCSRISIKYNIPVILISIKNGYGKASCRSIEGINIFDILKSVSDKLERFGGHDL
AAGFLVSEKYLGEIEKHLRQRLAKKNRENVQKTLHVDAWLNIEHLNKRKLHEINRLSPFG
LDNQEPNFMDSDINFLNLTRFGINNRHFKGFVRKNNRIISVIGYNLGHKLKTNNFYKKKF
KMVYTPIFKSVHSDLFIELKIKDFK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgggaattaaaaagctataatgaagattatttgacatcaaaaagttctgaattt
ggtgaaagcaggttaatttcaagattgcttttaaatcgggaaattaatacgaaggaaaaa
gtttctaaatttttaaattcagacaagggggacatacataatccatttttgtttgaaaat
atggaaaaagtcgtagaaagaataaaaaaagctggaagaaataaggaaaaaattgtaatt
tatggagattatgacgttgacggtatttccggagtggcatatctggtaataatgcttcga
aaattggggcttaatgtcgattattacattccaaatcgtgttcacgagggaataggtata
aataaaaatcttttgaattttctgaaaaaacgggatgcaaaattgtttataacagttgat
atttcaataaataaccgtgaagagatattaatgttaaaaaatagtggcattgacataatt
ataacggatcatcatagacagattggggtgctggaggataaggagcaggaaaaagaatta
ggcattcttacaataaatccaaagactagtgagacttatcctaataaatccctgtcaggc
tcaggagttgcctttaaactcgctgatgctgtctatgaaagatatggtgtaaataaaaaa
atactgtatgattatatggatattataatgattgggacagttgcagatgttgtgccaatg
acggatgaaaacaggtttatcataaaaaaagggttaaataacctaaaaaaaaccaaaata
aaaggtttgaagtatatcattaactatttgaagataaatcctagaaatataacaaccagt
gatattggatttttcattgcaccaatttttaatgcacttggaagaattgataattcaaaa
attgttgtaaatttctttattcaggaagatgactttaaacttttctcgattattgaggaa
atgaagcgagctaataaaatcagacgttatttggaaaatgagatttataatgagctggaa
gaaaaaatacagcgactagaacgtccaaaatatatttttatgaaaagcaggaaatggcat
tctggcgtaataggtgtagtatgttcaagaatctcaataaaatacaatattccagtaatt
cttatttcaataaaaaacggatatggaaaggcatcgtgtagaagtatcgaaggaattaac
atttttgatattttaaaaagtgtgtcagataaattggagcgatttggaggacatgacttg
gcggcaggatttcttgtttcggaaaaatatttaggcgaaattgaaaaacatttgcggcaa
aggcttgctaaaaagaacagggaaaatgtgcaaaaaactttacatgtagatgcatggctg
aatatcgagcatttaaacaaaagaaaattacatgagataaataggctatcaccttttggg
ctggataatcaggaaccaaactttatggattcagacattaattttctgaatttaacgaga
ttcgggataaataatcggcattttaagggatttgtcagaaagaataaccgtattatttcg
gtaattggatataatttaggacataaattgaagacaaataatttttataagaaaaagttt
aaaatggtttatacaccgatatttaaatctgttcattcggatttatttatcgaactgaaa
ataaaggattttaaataa
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