Leptotrichia trevisanii: JMUB4039_1990
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Entry
JMUB4039_1990 CDS
T06733
Name
(GenBank) RpoD subfamily RNA polymerase sigma-70 subunit
KO
K03086
RNA polymerase primary sigma factor
Organism
lte
Leptotrichia trevisanii
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JMUB4039_1990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lte03021
]
JMUB4039_1990
Transcription machinery [BR:
lte03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JMUB4039_1990
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
RPA_C
EhaM
UBR7_C
YaaT_C
B5
Motif
Other DBs
NCBI-ProteinID:
BBM58004
LinkDB
All DBs
Position
complement(2205593..2206771)
Genome browser
AA seq
392 aa
AA seq
DB search
MSDKKQNLKNSLANFIKQAREQKVVSYEEINSVLSIGFSTEKIDQLIKKLTDDGVQIVNT
KKEKESLLKVPDSLADIEKMEISDFEDSHDEFVENEIDDSEVDKLLQTDLLKMAESMDVD
EPIKMYLREIGQIPLLSYEEEIDYAQRVLNGEEEAKQKLIESNLRLVVSIAKKHTNRGLK
MLDLIQEGNMGLMKAVEKFEYEKGFKFSTYATWWIRQAITRAIADQGRTIRIPVHMIETI
NKIKKESRIILQETGKEPTAEELAEKLELPVEKVKSILEMNQDPISLETPVGSEEDSELG
DFVEDDKFANPYDATTRVLLKEQLDEVLKTLNEREEMVLRYRYGLDDGSQKTLEEVGKIF
NVTRERIRQIEVKALRKLRHPSRRKKLEDYRS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataaaaaacaaaatttaaaaaatagtctcgcaaattttataaaacaggcacgt
gagcaaaaagttgtaagttacgaagaaataaattctgttttatctattggattttcaact
gagaaaattgatcagttaataaaaaaattgactgatgacggtgttcaaattgtaaatacg
aaaaaagaaaaagagagcttgttgaaagttcctgattctctagcggacattgaaaaaatg
gaaatatcagattttgaagattctcatgacgaatttgtggagaatgaaatcgacgattcg
gaagtggataaattattacagacagatctattgaaaatggcggaaagtatggatgtggat
gaaccaataaaaatgtacctgcgtgaaattggacaaattccattacttagctatgaagag
gaaattgactatgctcaaagggttttaaacggtgaagaagaagcaaaacaaaaattaatt
gaatcgaatttaaggctcgttgtaagtatcgcaaaaaaacatacaaatcgtggcttgaaa
atgctggatttaattcaggaaggtaatatggggcttatgaaggctgtggaaaaatttgaa
tatgaaaaaggtttcaagttttcaacttatgcaacttggtggattagacaggcgataaca
cgtgcaattgcagatcagggaagaacgataaggatacctgttcatatgattgaaacaatt
aacaaaatcaaaaaagaaagtcgaattattttacaggaaactggaaaagagccgacagcg
gaagaattagccgaaaagctggaattgccagtggaaaaggtaaaaagtattctggaaatg
aatcaggatccaatttcgcttgaaacgccagttggaagtgaagaagacagtgaattggga
gattttgtggaagatgacaaatttgcaaatccttatgatgcgacaacgagagttctgtta
aaggaacagcttgatgaagttctaaaaacattgaatgagcgtgaagaaatggtactcaga
tatagatatgggctagatgacggttcccaaaaaacattggaggaagttggaaaaatattc
aatgttacaagggagcgtatcagacagattgaggtaaaagcgttaagaaaattaagacat
ccgagcagaagaaaaaaattggaagattacaggagctaa
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