Leptotrichia trevisanii: JMUB4039_2416
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Entry
JMUB4039_2416 CDS
T06733
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lte
Leptotrichia trevisanii
Pathway
lte03420
Nucleotide excision repair
lte03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lte00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JMUB4039_2416
03430 Mismatch repair
JMUB4039_2416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lte03400
]
JMUB4039_2416
Enzymes [BR:
lte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JMUB4039_2416
DNA repair and recombination proteins [BR:
lte03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JMUB4039_2416
MMR (mismatch excision repair)
Other MMR factors
JMUB4039_2416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_11
UvrD_C_2
Chlor_dismutase
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BBM58406
LinkDB
All DBs
Position
2649439..2651463
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AA seq
674 aa
AA seq
DB search
MLSKINDKNLLKEKEILKNLFKNISKNKSTLFNAGAGAGKTYSLIECLKYVIREEGKNLE
NKNKKVICITYTNVATNEIKERLGNTNLILVSTIHERIWSLINNKLYQSKLVEIHFEYTK
EKIKEENEKLKKNKKYLLYNKEEKSYINEIISKTNIKIQFLNKDNFEEELKKENISDEIF
FDMKVTNFKEIYKKLKKISKLENCLKEIENKKYKNIEYTPLFNFDVLHKMKISHDTLLEY
GYRMIKKFDLLKQIIIDKYPYIFIDEYQDTDEKVVKIMNLLDEYSKKINHKFYVGYFGDY
VQNIYNSGVGELIKELHTDLDNVYKKYNRRSAKEIIEVANKIKKNEFPQESIYEDSDGGT
IEFFSGKEEEIKAFLEKVEKEWNITQDSPLHCFILTNKLIAEYSGFQDIYDFFYKSDYYK
KNYNQLTSELFSNDMTKLGNIPSLFFKIIKFLHDLQSEKTFITGIFNKVYREKSLEQLKN
LKKILIEIRNSKKETLNDYLERIFELYNKNENTDYQIIVRNVFQIDKVSLENLKKYIIQE
LFDNEYEKNINEVENFFKIEMNQYFNWYKYLMEERGEKIYYHTYHGTKGREFENVVIIMK
NSFGGNNKDFFSNFFKNYNLEFKKQDLKKHSEARNLLYVSVTRAIKNLKIFYTDDISEFS
ENIKEIFGDIKKFQ
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgttatcaaaaataaatgataagaatttattaaaagaaaaagaaattttaaaaaattta
tttaaaaatatatctaaaaataaaagtactctttttaatgcgggagcaggtgcagggaaa
acttattctctaattgaatgcttaaaatatgttataagagaagaaggaaaaaatttagag
aataaaaataaaaaagtaatatgtataacttatacgaatgttgcaacaaacgaaataaaa
gaaagattgggaaatactaatcttattttagtttcaacaattcatgaaaggatttggagt
ttgataaataataaactttatcaatctaagttagtagaaattcattttgaatatactaaa
gagaagataaaagaagaaaatgaaaaattgaagaagaataagaaatatttgttgtataat
aaagaagaaaaaagttatattaatgaaatcatatcgaaaactaatataaaaatacaattt
ttgaataaagataattttgaagaagaattgaaaaaagaaaatatttctgatgaaatcttt
tttgatatgaaagttacgaattttaaagaaatttataaaaaactaaaaaaaatatctaaa
cttgaaaattgtctaaaagaaatagaaaataaaaaatataaaaatatagagtatacgcct
ttatttaattttgatgtgttacataaaatgaaaataagccatgatactctactagaatac
ggatatagaatgataaaaaaatttgacttattaaaacaaataataattgataaatatcct
tatatttttatagatgagtatcaagatactgatgaaaaagtagttaaaataatgaattta
ttagatgaatattcaaaaaaaattaatcataaattttatgtcggatattttggagattat
gtacagaatatttataatagtggagtaggtgaattaataaaagaattgcatactgattta
gataatgtctataaaaaatataatagaagatctgctaaagaaattattgaagttgcaaat
aaaattaaaaagaatgaatttcctcaagaatctatatatgaagatagtgacggtggaaca
atagagtttttttctggaaaagaagaagaaataaaagcctttttagaaaaagtagagaaa
gaatggaatataacacaagatagtcctttacattgttttatattaacaaacaagttaatt
gcagaatattctggttttcaagatatttatgattttttttataaaagtgactattataaa
aagaattataaccaattaacgtcagaattattttcaaatgacatgacaaaattaggaaat
atccctagtttgttttttaaaattattaaatttttacatgatttacaaagcgaaaaaact
tttataacaggtattttcaataaagtttatagagaaaaaagtttagaacaattaaaaaat
ttaaaaaaaattctgattgaaattagaaatagcaaaaaagaaactttaaatgactattta
gaaagaatatttgagctgtataataaaaatgaaaatacagattatcaaataatagtgaga
aatgtatttcaaatagataaggtatctttagaaaatctaaaaaaatatattattcaagaa
ctttttgataatgaatatgaaaaaaacataaatgaagttgaaaatttttttaaaattgag
atgaatcaatattttaattggtacaaatatttgatggaagaaagaggagaaaaaatatat
tatcatacgtatcatggaactaaaggaagagagtttgaaaatgttgttataataatgaaa
aattcttttggaggaaataataaagattttttctctaatttttttaaaaattacaattta
gaatttaaaaaacaagatttaaaaaaacacagtgaagcaagaaatttactatatgtgtct
gtaactagggcaattaaaaatcttaaaatattttatacagatgatatttcagaattttct
gaaaatataaaggaaatatttggagatataaaaaagtttcaataa
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