Lachancea thermotolerans: KLTH0A02464g
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Entry
KLTH0A02464g CDS
T01117
Name
(RefSeq) mRNA-binding protein RRP12
KO
K14794
ribosomal RNA-processing protein 12
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0A02464g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Other 90S particles
KLTH0A02464g
Pre-60S particles
Other pre-60S particles
KLTH0A02464g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT
Motif
Other DBs
NCBI-GeneID:
8290363
NCBI-ProteinID:
XP_002551566
UniProt:
C5DBG7
LinkDB
All DBs
Position
A:208530..212180
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AA seq
1216 aa
AA seq
DB search
MNQDEIATLLQLEDKLGQIRQQINSKLENQKHVAIILSAVEENMDEQQVAAKNIVNYLIS
LMSLLDQAINPETHEIVELQISTSVAYLLDIVLKYTPKQLLRSKFADILTKFAPCITDEK
AEAPLIRSAVGCLETLLVAQDAQSWNNTHNLSIAPSRGLNGLLELSLDPRPKVRKRAQEA
VGNIMSNPPASPTAEHVAAPLVAEFSISALASAVEEVSSTSNKKIRAQGGLKELNAKAIH
ILKLINTVLSSNQWPSSRFDVLCDLLLEMSRSADQFMVSNAFQCFEALFQSIAESAAAFG
LAENKFSKVLDIIFSLKPSNSDTHLVGAWIAVVAKGMTTFGSCSPLSCLEKIPEVINVLS
LYLSSEVPEVYTSASQCVEALLTGCIQDDLLLLPPQVNENVYEKVDETISYLAGAFSDFL
SIKYAHCAKEILQNLTTAFKKLRIRSNPDLLPPLEIVGGWRTNEDNFLEMRAEIETVIGA
AVSAIGPDAVLGCLPLNLTDASGSKPGRAWMIPLIRDNTCNSRLAIFVQEFLPLIQFFDE
KVTALPSDSVQSKVFETVSGQLWSTLPNFANLPTDLRDSFSDQFAADLSSLLYSKVDLRP
IICHAIKNLVESNVQHASLLDDNDKLLEQHFPKSESQKNLEYLSTKASNLLAVLFNVYTQ
TAPNARSYILETIIAVLKITSPEDLTKTFNNVCALLKKSFDEEPADAKSKTSPVKVSATL
LDLVVVMASYVPESCYGALFSIFNTTVNSSDALTQKRAYRIITKLSEVDKSSESVLKYVA
EIEQILIQSSKVVHTSARASRLSAIKVLVDLLPLGHLDFVIQIVPEVILSTKDNNEKSRE
GAFETLIAMTHKMNTPGSVMKLSKVPGYDAQTPDQPTSVAEFFKIISAGLIGESQHMVSA
TITAYSCLVFEFKDYVSTGVLIEIYDTIELYLTSNSREIVKSAIGFAKVCCLALPEELMK
SKIPSLLPKLLRWSHEHTGHFKARVKHIIERLIRKFGYEYIEQNFPEEDNRLLVNIRKTR
NRNKKKAAESMETAPKLSEASKKGSRFMSALDEALYESSDAENSADDETAPKRGKASRFI
VESKENPLDLLDSQTLAHISSTRPRKFDAASRKKGRDHVFSFDADGKLLVKDEKKPSESD
DVFDSSSSGINAYLEAVKHGPVRGQKNKLKFKKGTRAGDNDFSDDEGANKSFKPNMNGKK
VQKKKGGPKFRSNRKL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaagacgaaattgcaaccctgcttcagctagaagacaaattaggccagatcagg
caacaaattaattctaaactagagaaccagaagcatgtggcgatcatcttatccgccgtg
gaagagaacatggatgagcaacaagttgctgctaaaaacattgtaaactatttgatttca
ctcatgtcccttctggaccaagccatcaatccggaaacccacgaaattgttgagcttcag
atatcgacttctgtggcttacctcttggacattgtactgaaatacactccaaaacagcta
ctgagatcgaagttcgctgatatactcacaaagtttgcaccatgcattaccgatgaaaaa
gcggaggcgccgttaatacggtctgctgtggggtgtttagaaactcttcttgttgcacaa
gatgcccagtcctggaacaatacccacaatctcagtatcgcccccagtagaggtttgaac
ggtttgctagagctctctttggatccaagaccgaaggttagaaagagagctcaggaggcc
gttggcaatataatgtcaaatccaccagcatcgccaaccgcagagcatgtcgcggcgcct
ctcgtggcagaattctccatcagtgcactcgcgtctgctgtggaggaagttagctctact
tcgaacaaaaagattcgtgctcaaggcgggttaaaggagctcaatgcaaaagccatccat
attctcaagctaataaacactgttttgtccagtaatcaatggccttcttcaagatttgat
gtactctgcgatcttctgctagaaatgtccaggtctgctgatcagtttatggtatcaaat
gcattccagtgttttgaggctctctttcaatcaatcgcagagtcagctgccgctttcggc
ttggcagaaaacaagttttcaaaggttttggacataattttctccttaaaaccttcgaac
agtgacacgcacctggtgggagcgtggattgccgttgtcgcaaaaggcatgaccactttt
ggatcatgtagccctctatcatgtctagagaaaattcccgaagtcatcaatgttctgagt
ttgtatctctctagcgaggtgcctgaagtttacactagcgcttctcaatgtgtggaagct
ttattaactggatgcatccaagacgatttgctgctattgccaccacaagtgaacgaaaac
gtatatgagaaggttgatgagacaatttcttatcttgctggagccttcagcgactttctt
tccatcaaatatgcgcactgtgcgaaagaaattctacagaatctcaccactgctttcaaa
aaacttagaatcagatcaaaccctgatcttctacctccgttagaaattgttgggggatgg
cggacgaatgaagacaactttttggaaatgagggccgaaatagagacagtaataggtgct
gctgtatctgctattggtcctgatgctgtcttgggttgccttcccctaaatctaacggac
gcgtctggcagtaagcctggccgtgcttggatgatacctcttataagagataatacttgc
aatagtagactcgcgatatttgtgcaagaatttcttcctttaattcaattttttgacgaa
aaggttactgcgcttccaagtgattcagttcagagcaaggtttttgaaacagtgtctggt
cagctatggtctactctgcccaactttgctaaccttcctactgatttgagagactctttt
agcgatcaatttgcggctgatctttcgtctctactatacagcaaagtggacttgaggcct
ataatttgtcacgcaatcaaaaaccttgttgagagcaacgtgcaacatgcaagtttgctg
gacgacaatgacaagctcttggagcaacatttccctaagagtgagtcccagaagaacttg
gagtatctatcaacaaaagcatctaatctattagctgtgcttttcaacgtctacacacaa
acagctcccaatgccaggagttacatcctggaaaccattattgcagtgctgaagattacc
tcaccagaggacttgaccaagacttttaacaacgtttgcgcgctattaaagaaatctttt
gacgaagaaccggctgacgccaaatcaaagacctcgccagtcaaggtgagcgccacactt
ctggatttagtagttgttatggccagctatgtccctgaatcgtgttacggggctttgttt
tcaattttcaacaccacagtcaactcgagcgatgctttgactcaaaagcgtgcttacaga
attatcactaaactttcagaggtggacaagagctcagagtcagttttgaagtatgtcgct
gagatcgagcaaatactgatccagagcagcaaggttgttcacacttctgctagagcatcg
agactcagtgcgatcaaggtcttagttgatctgctaccattaggtcacttagattttgtc
attcaaattgtgccagaagtcatcctctccactaaagataacaatgaaaaatctagagaa
ggggcatttgaaacgctaattgcaatgactcacaaaatgaacactcctggatcagtcatg
aaactttcaaaggttcctgggtatgatgcacagacgccagatcaacccaccagtgtcgca
gagttcttcaagattatttcagcaggtttgattggtgaatcccaacatatggtgagcgct
actatcactgcatattcctgtttagtctttgaattcaaagattatgtttcaacaggtgtt
ttgattgaaatctacgacaccatcgagctttacctgacctctaactctagggagattgtt
aaaagcgcgattggctttgctaaagtctgttgtttagctttgccagaggaattgatgaaa
tctaaaattccgtcccttcttcccaagctcttgaggtggtctcatgagcatactggtcac
tttaaagcgagagtcaaacacataatagagagattgattagaaaattcgggtatgagtac
attgagcagaacttccctgaggaggacaacagattgcttgttaacatcagaaaaactcgc
aacagaaacaagaaaaaggcagcagaaagcatggaaactgcacctaaactcagcgaggcg
agcaaaaaaggttcaagatttatgtccgcacttgatgaggctctgtacgaatcatcagat
gctgagaacagcgcggacgatgaaactgcaccaaagagggggaaagccagtcgctttatt
gtcgaatctaaagaaaatcctttggacttgctcgactctcaaacgttagctcacatatct
tccacaaggccacgtaaattcgacgcggcatccaggaagaaaggcagagaccatgttttc
agtttcgatgctgacggtaaattacttgtgaaagacgagaaaaagccatcagaaagcgat
gacgtatttgactcatcatctagcggtattaatgcttacttagaagcagtcaagcacggc
cctgtgagaggacaaaaaaacaagctcaagttcaaaaagggtactagagctggcgataac
gacttcagcgatgacgaaggtgcaaataaatcattcaaacctaacatgaatggcaaaaag
gttcagaagaaaaaaggcgggcccaaatttaggtctaatagaaagctctaa
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