Lachancea thermotolerans: KLTH0A03652g
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Entry
KLTH0A03652g CDS
T01117
Name
(RefSeq) CCR4-NOT core subunit NOT3
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0A03652g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0A03652g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLTH0A03652g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLTH0A03652g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8290417
NCBI-ProteinID:
XP_002551617
UniProt:
C5DBL8
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Position
A:314336..316654
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AA seq
772 aa
AA seq
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MAHRKLQQEVDRVFKKISEGLEIFDTYYERHENCTNNPSQKDKLECDLKREVKKLQRLRE
QIKSWQSSPDIKDKDSLLEHRRSVEVAMEKYKAVEKASKEKAYSNNSLKRSDNLDPKERE
RQEITDYLSQSIEELERQYDSAQVEVDKLILLNKKKKTATTANEEKKNQLKDLQGRYRWH
LQQMELALRLVANQELDPEDVKRVKDDINYFIESNQEPDFVEDETIYDGLDLTSNEAIAH
EVAAAFAAQRSEELEEDMVKEGAKLSKKEQRKLEREAKKAAKASAKTGSGTETLPESAGI
VIPQKNEPRQIDSVSESASVSASRSPSPDVSSAGTSIPNTANSKSTIQPSSSAGPVNLMG
KLPGSQIKQQTISREATPELQGHTHIHQSLNGITTTSTLKPATVPARPVGDLRWAAAASQ
AAEKEKKAEHLNHQAAKSQSTSSSVNNSATTSAASTPIVTKQALTPVGQKRILSNSQMLT
ATVPSSVGIQVSNNTLPSQKTVNSQDAKAGEPAVEEVIDDTYDSDYSLDDFDESSDDEII
DDEESATKSQIRENLRETLSDDLELLVLPGGVQDFIMSSLLSRNGLNRSNGSCSKLRTLR
DACRVSRLDNIPRSVNPPSPLDAFRSTSVWDVTRCSLRDEIGEFGGDKPAERAHLLEKFR
GLETFFLFYCFYYSITPLEQEIAYTLLGERNWKVSKTGENWFSRHSLPKFSNELCEVADF
KIFNLDDWTVTDKLNFKLDYSILRDPPSTEAEPSLVDDANESGAWTKSTVVQ
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atggcgcataggaaattacagcaagaggtggatcgggtgttcaaaaagatcagcgaaggg
ctggagatatttgacacctactatgagaggcatgagaactgcaccaataacccatcgcag
aaagacaagctggaatgcgacctcaagagggaagtgaaaaaactgcagcggcttcgagaa
caaattaagtcgtggcagagctcgcccgacataaaggataaggattcactgctggaacac
aggcgatccgttgaggtagcaatggaaaaatataaagctgttgaaaaagcatctaaggag
aaggcctactcgaataacagccttaagcggtctgacaatctcgaccctaaggaaagggaa
cgtcaagaaatcacggactatctgtcgcagtcgatagaggaactggagcggcagtacgat
tcggcacaagttgaggttgacaagctgatattgctcaacaaaaagaagaagacggccaca
actgcaaacgaggagaaaaagaatcagctgaaagacctccaggggagatacagatggcat
ctgcaacagatggagcttgcgctgcggcttgttgcaaatcaagagcttgatccagaggac
gtaaagcgcgtaaaagacgatattaactacttcattgagtccaaccaggaaccagatttc
gtagaagacgaaacaatatacgatggactggacttgacgtcgaatgaggccattgcccat
gaagtcgctgcagcttttgctgcacagcgcagtgaagaacttgaggaagacatggtcaaa
gagggagcgaagctctccaaaaaggagcaaaggaaactagaaagggaagcaaaaaaggcc
gcaaaggcctcagccaaaacaggaagtggtactgagacgcttcccgagtctgcgggcata
gtgatccctcagaaaaacgagccaaggcaaattgacagtgtgagtgagtcggcttccgtc
agtgcgtcgcgatccccatcgccagatgtctcatcagcaggtacgagcataccaaatacg
gccaactcaaagtcaacgattcaaccatcatcatctgcaggtcctgttaatttaatgggt
aaactgccaggctctcagatcaaacagcaaacaatatccagagaagccactcctgaactt
cagggccatacgcatattcatcaatctctcaatggtataacgactactagcacattgaag
cctgccacggtacccgcaagacctgtaggtgacttgcggtgggccgctgcagcttctcaa
gccgctgagaaagaaaaaaaggctgaacatctaaatcaccaagcggctaaatcacaatct
acctcctcttctgtgaataacagtgccacgacaagcgctgcgagtacgccgatagttact
aagcaagcgttgacgccagttgggcagaagagaattctttcaaattcccaaatgctaact
gcgacggtgccatctagcgtcggcattcaggtctctaacaacacattgccaagccagaag
acagtaaattcccaagatgccaaggctggcgaaccagcagtagaagaggtaattgatgat
acttatgattcggactatagtcttgacgactttgatgaatcttcggacgatgaaataata
gatgatgaagaaagcgcaacaaaatcacaaataagggagaacttgcgggaaactctatcc
gacgatctggagcttttggttctgcctgggggagttcaagacttcattatgagctctctt
ctgtccagaaatggtctcaatcgttcaaatggcagctgtagtaagctgcggactttacgc
gacgcatgtcgtgtctcgcggctggacaatatacctcgatctgtgaaccctccatctcct
ttagatgcgtttcgctctactagcgtatgggatgttacgaggtgtagcctccgtgatgag
atcggggaattcggtggagacaaacctgcggagcgcgcccaccttctggagaaatttcgc
ggtctggagaccttctttttattctactgcttttactattcaataactccgctggaacaa
gaaattgcatatacccttctcggcgaaaggaattggaaagtttccaaaactggagaaaat
tggttctccagacatagcttgcctaagttctcgaacgaactttgcgaggtcgccgacttc
aagattttcaaccttgatgattggaccgtcacggataagctaaacttcaaactggactat
agcattttgagggatcctccttcgacagaagcagaaccaagccttgtcgacgacgcgaat
gagtcaggagcttggaccaaaagcaccgtggttcagtga
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