Lachancea thermotolerans: KLTH0A04532g
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Entry
KLTH0A04532g CDS
T01117
Name
(RefSeq) CCR4-NOT core ubiquitin-protein ligase subunit MOT2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0A04532g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lth03000
]
KLTH0A04532g
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0A04532g
04121 Ubiquitin system [BR:
lth04121
]
KLTH0A04532g
Enzymes [BR:
lth01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
KLTH0A04532g
Transcription factors [BR:
lth03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
KLTH0A04532g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLTH0A04532g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLTH0A04532g
Ubiquitin system [BR:
lth04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
KLTH0A04532g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Baculo_IE-1
SET_assoc
PocR
Rtf2
zf-RING_2
Prok-RING_4
zf-CCCH_2
zf-C3HC4
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
8290457
NCBI-ProteinID:
XP_002551653
UniProt:
C5DBQ4
LinkDB
All DBs
Position
A:378016..379851
Genome browser
AA seq
611 aa
AA seq
DB search
MNKTTTAANMHAIQNALANYDTSFLSDDEEDYCPLCIETLDITDKNFKPCPCGYQICQFC
YNNIRQNPELNGRCPACRRKYDDESVEYIVLTPEEMKLEQAKQVRKEKERKLRDKERKEN
EFANRKHLAGMRVIQKNLVYVVGLNPPVPYEDVAALLKSDRYFGQYGKINKIVVNKKTAH
NDHHSGPASGSHGHHTGYGIYVTFAKKDDAARCIAAVDGTYLDGRIVKAAYGTTKYCSSY
LRGQSCPNPNCMFLHEPGEEADSFNRRELTNKQHDHSAFKQLGGSSSSLPSNKAAASAIV
PPSASPAPSPLPIKTHLNSSHNQEEISSSSSTSAAHTPVLTPALVPSGSNPWGVNSAAAP
SFSSAAAKTTTSSAFPTLGEATLAQSMAALSTKDSGAGTAHSSTKSNKKNLEKKYIDPYD
PLSSAVRFIDDTIKFLSEYRNCHFKLRSNVIDEETYKSYPSLFSFENVPVSKTSDNTLSR
KLVDMLAIKPVDHSASVLPYLQATPQADPLVLHQLQQQQQQQQLLLAKQQQQLQQQVQTH
QQTQQPTPPGMTPQLLHAQLQQQRAVNTPPPPGIFSPSNPPTSANQVPVTGSNSSDLLNQ
LINGKRISTSS
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgaataagacaaccaccgcggcgaacatgcacgccatccaaaacgcgctcgccaactac
gatacctcctttctttcggacgacgaagaagactattgcccactgtgtatcgaaacactc
gatatcaccgataaaaacttcaaaccgtgcccctgcggctaccaaatatgtcagttctgc
tacaacaatatccgccagaacccagagctgaatgggcgctgccccgcgtgtcgccgcaaa
tacgacgacgagagcgtcgagtacatcgtgctcacgcccgaggagatgaagctcgagcaa
gccaaacaggtaaggaaagaaaaggagcgcaagctgcgcgacaaggagcgcaaggagaac
gagttcgcgaaccgcaagcatctggcaggcatgcgtgttatccagaagaacctagtatat
gtagtgggtctgaatccacctgtcccctacgaagacgttgcggcgctgctgaagtccgac
aggtacttcggtcagtatggaaaaatcaacaagattgtggttaacaagaagactgcgcac
aacgaccaccacagcggccctgcctctgggagccacggccaccacacagggtacggcatc
tacgtcaccttcgccaaaaaggacgacgccgcccggtgcatcgcagcagtagacggcacg
tacctagacgggcgaattgtgaaagctgcgtacggtaccaccaagtactgttcgtcgtac
ctcaggggccagagctgccccaaccccaattgcatgttcttgcacgagccgggagaggag
gccgactccttcaacaggcgtgagctcaccaacaagcagcacgatcactcagctttcaaa
caactgggcggcagcagttccagcctgccgtccaacaaggctgccgccagtgctattgta
cctccatcagcgtctcctgctccctcgcctctgccaatcaagacgcatttgaacagcagt
cacaaccaggaagagatctcgtcgtcatcatcaacctcggccgcgcacacgcctgtgttg
acgccggctctcgtgccaagcgggtccaatccgtggggtgtcaactcagcggcagctccg
tccttctcttccgctgccgccaaaacaactacctcatccgcgttccctactctcggcgaa
gccactcttgctcagtcgatggccgcattgtcaaccaaagactcgggtgctggtaccgcc
cacagcagcacaaagagcaacaaaaagaaccttgagaagaaatacattgatccctacgat
cccttgtcgagcgctgtcaggttcattgatgatactatcaagtttttgtcggagtacaga
aattgtcacttcaaactgagatccaatgtcatcgacgaggaaacctacaaatcgtatcca
tctcttttctcttttgaaaacgttccggtatccaagacctctgacaacactctgagcaga
aagctggttgacatgcttgctatcaagcctgtcgaccattctgcctcagtgctgccctac
ttgcaagccacaccacaggccgacccacttgtcctacaccagctacaacaacagcaacaa
cagcagcaacttttgcttgctaaacaacagcagcagttgcagcaacaggttcagactcac
caacaaacacagcagcccaccccacctggcatgaccccacagctcctccatgcccagctt
caacaacagagagcagttaacactccaccaccccctggcatattctccccttccaaccct
cccactagcgcgaaccaagtcccagtgactggcagcaattcatcagatctgctaaaccaa
ctaattaacgggaagagaatctccaccagcagttaa
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