Lachancea thermotolerans: KLTH0A05676g
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Entry
KLTH0A05676g CDS
T01117
Name
(RefSeq) ESCRT-0 subunit protein VPS27
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
lth
Lachancea thermotolerans
Pathway
lth03250
Viral life cycle - HIV-1
lth04144
Endocytosis
lth04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
KLTH0A05676g
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
KLTH0A05676g
04145 Phagosome
KLTH0A05676g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0A05676g
Membrane trafficking [BR:
lth04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
KLTH0A05676g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps27_GAT-like
VHS
FYVE
UIM_2
UIM
GAT
USP_UIM_N
zf-AN1
Motif
Other DBs
NCBI-GeneID:
8290509
NCBI-ProteinID:
XP_002551705
UniProt:
C5DBV6
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All DBs
Position
A:469968..471845
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AA seq
625 aa
AA seq
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MSAAVSTPSQLDSLIQRATSESIPNGEIDLSLALEVSDVIRSRRVPPKECMRCIKKRIMS
SRSNPNRSLSAWRLTEVCLKNGGVPFIKEVCSREFMDSLEHAILQEESNDELEILCKGML
QDLYVAFRNDSQLNYVSKVYQRLEAKGVDFPSNPSRHSELAAAMFDSKTPADWIDSDTCM
ICSNKFSLLNRRHHCRSCGGIFCQEHSSRFIPLPDLGIYDNVRVCDNCFDDYETKKQSDK
KRKKKKKGHGKSSSVRDQEEEELKKAIELSLRDARSEDTFVPVVPVQKAPSPQAIDEEED
EDLKAAIAASLRESEEAKRRQQERQQTPVAEGYSVPDVPPPLPSNELTTSEEDDIQLFAS
LVERMKYQPPTAILEDTQLQQLYRKVMGTVPKLNIALSETSHKYNTLMNMNGKISDIMNI
YDSLLEKQLQSINLNQQYFMPQLPSDPYAYYNVGQQNSPHVNPAALPQQNQHIQVSSPAL
NRQHVSESKVPSMPASELRPLEGHASPNHIEQLKSIAIEQEAPQKQSLSSPRPYPDETQE
EQNPCLSDPYPNGISKNGPAQAPSDPPYPNDDEEKEESLRQAHPKLDKITNFDFPTVPVQ
QPPVEEHVKEEPEEANEQEQLLIEL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgctgttagtacgccttcacagctagactctttgatacaaagggctacaagc
gagtcaatcccaaatggagagatagatttgtctttggccttggaagtatccgacgtaata
aggtcaaggagagtgcctccaaaagaatgcatgcggtgtatcaaaaaacggatcatgtct
tcgcgctccaatccaaacagaagcctatcagcctggcgcttgactgaggtttgcttgaag
aacggtggcgttccattcataaaggaggtttgttcacgcgagttcatggattcactggag
catgcaatactacaagaagaatcgaacgatgagctcgaaattctttgcaaaggcatgtta
caagacttgtatgtggcgttccggaatgacagccagttgaattatgtttccaaggtatat
caaagactggaagctaagggcgttgactttccctcaaacccttctcgccactcggagcta
gcggctgcgatgtttgattccaagacccccgcagattggattgactctgatacctgcatg
atttgctctaacaaattttccttacttaatagaaggcaccactgtcgctcctgcggtggc
attttttgccaagaacactcttcgcgctttatcccgctacccgacctcggcatttacgac
aatgtcagagtctgtgataactgctttgacgactatgagacaaaaaagcagtcagacaag
aagcggaagaagaagaagaaggggcacggtaagagtagttctgttcgagaccaggaggaa
gaagaactcaaaaaagcgatagagctttcgttgagagatgctcgttcagaagacacattt
gtgcctgtagtgccagtccaaaaagctccttctccccaggcaatcgatgaagaagaggat
gaagatctcaaagcagctattgcagcgagtcttcgagagtctgaagaagcaaagcggaga
cagcaagaacggcaacaaacacccgtcgcagaagggtacagtgttcctgatgtgccaccc
cctcttcccagcaacgaactgacaacctcagaagaagacgacatccaattgtttgcaagt
cttgtagaacgcatgaaatatcagccgcccacagcgattttggaagatacacaattgcaa
cagctttaccgtaaggtcatgggcactgtaccaaaactcaacatagctctaagcgagacc
tctcacaagtacaacacgctaatgaatatgaatgggaaaatatcggatatcatgaacatt
tacgattcactgcttgaaaagcaactgcagtccattaatctaaaccagcagtattttatg
cctcaattgccatcagacccttacgcatactacaatgtaggtcaacagaactcgccgcat
gtcaatcctgctgctctccctcaacaaaaccagcacatccaggtgtctagtccagcgttg
aacaggcagcacgtttctgaaagtaaagtgccttcaatgcctgcctctgaactacgtcca
ctcgagggacatgcgagcccaaaccacattgaacaactaaagtcaatagcaattgaacag
gaggcaccccaaaaacagtcattgtcctctccacgtccttacccagacgaaactcaagaa
gaacaaaacccatgcctttcggatccttatccaaatgggatcagcaagaatggaccagct
caagctccctcagatcctccatatccaaatgatgatgaggagaaagaagagagtttacgg
caagctcacccaaaattggataaaataaccaacttcgacttccctacggttccagtccag
caaccgcctgttgaggagcatgtgaaggaggagcctgaagaagcgaatgagcaagaacag
cttttgatagagttatga
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