Lachancea thermotolerans: KLTH0B03278g
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Entry
KLTH0B03278g CDS
T01117
Name
(RefSeq) KLTH0B03278p
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0B03278g
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0B03278g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0B03278g
Spliceosome [BR:
lth03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
KLTH0B03278g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
Pre-60S particles
Helicases
KLTH0B03278g
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
Motif
Other DBs
NCBI-GeneID:
8290764
NCBI-ProteinID:
XP_002551931
UniProt:
C5DCI2
LinkDB
All DBs
Position
B:complement(257395..259614)
Genome browser
AA seq
739 aa
AA seq
DB search
MDKQKFKDFEDFVPTISDSENEVPDLDGSEDETLHPETSTKTKSKKKKANNSNPNEDIHE
DLNPSFRFDLDGAEVSSGFEGWNFDGDKKLETNPDVDLDGIIRRKGGLIQMAGTGDSESD
GSEKESESEGELALDGFGMGADEKSSKCQSATHEGDATDSEGDESGVDEDSGVESDKQTE
GQEALMTAGNGSVSDIEDDSEEAKAEFYALEEESTEAKKTVHTNFNSLSLSRPVLKGLGA
LNYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAYMIPIIERLLYKPAQIASTRVIVL
TPTRELAIQVSDVGAKLAKFVNGISFGLAVGGLNLRQQEQTLRSRPDIVIATPGRLIDHI
RNSASFNVDSVEILVIDEADRMLEEGFQDELNEIMSLIPSKRQTLLFSATMNSKINQLIS
LSLKKPVKIMIDPPRQAAAKLTQEFVRVRKRDELKPALLFHLIRKLDDLSQKRVVVFVAR
KEVAHKLRIILGLLGMKVAELHGSLSQEQRLQAVNGFKSLQVPVLICTDLASRGLDIPKI
EFVINYDMPKTYDIYLHRVGRTARAGREGRSISFVGESSQDRNVVKNAIKSAEENKKQDT
VVGRMVDWAKVEEINKLTTNKDDVIAEILEEEKQEKEILRAEMEVRKGENMLKHKDEISA
RPRRTWFQTEGEKKNSKVIQALSKGKKTVNSKKRKRIEATEDRSRSYKKTQKDRGSDQQR
TYAKQKAKKEMKKKKQARK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggataagcaaaagttcaaagattttgaggattttgttcctactataagcgatagcgaa
aatgaggttccggacctagacggatcggaggatgaaactctgcatcccgagactagcacc
aaaaccaaatcaaaaaagaagaaggccaacaatagcaatcctaatgaagacatccatgaa
gatttgaaccctagctttcgattcgatctggatggcgcggaagtttcttctgggtttgag
ggctggaatttcgatggtgacaagaaattagaaacaaatccagacgttgatttggacgga
atcattagaaggaaaggtgggctgattcaaatggctggaactggggacagtgaaagcgat
ggctctgagaaagagtcagaaagtgagggcgagttggctttggatggcttcggtatgggc
gctgacgaaaagagttcgaagtgccaaagtgcaacacatgaaggggatgccacagattct
gaaggcgatgaaagcggcgtagacgaagatagtggtgttgagtccgacaagcaaactgaa
gggcaggaggctctgatgactgcgggaaatggatctgtaagtgacattgaagacgattct
gaagaagcaaaggcagaattttatgcgctagaagaagaaagcaccgaggcaaagaaaaca
gtacacacaaacttcaactccttgtcactgtcacgtccagttttgaaagggctaggggcg
ctgaactatgtgaagccctcgccaattcaaagtgctactattcccatagctctactagga
aaagacatcattgctggtgctgtgactggttctggtaagactgcagcctacatgattccc
attatcgaacgtcttctgtacaaacctgcacaaatcgcttctacacgcgttattgtatta
acaccaactcgtgaactggctattcaagtatctgacgtgggcgccaaacttgccaagttt
gtcaacggtatcagttttggccttgctgtgggtggcttgaacttgaggcaacaggaacaa
acattgagatccaggcctgacatagtcattgctacaccgggtagattgatcgatcacatc
cggaattctgcgagttttaacgttgattctgtcgagattctagttattgatgaagctgat
cgtatgctcgaagagggatttcaagatgagctgaatgaaatcatgtcattgatccctagc
aaaagacaaacattgttattctctgccacaatgaactcaaaaatcaaccaacttatatct
ctatccctgaagaaaccagtaaagatcatgatcgatccccctagacaggcagctgcaaag
cttacccaggaatttgttcgtgttcgtaagagagatgaactgaaacctgctttactcttt
catctcattagaaagcttgacgatttgtcacaaaaaagggttgttgtgtttgttgcgaga
aaggaagtggcgcataagcttagaattattctgggactgctgggcatgaaagtcgcagag
cttcatggatctttatctcaagaacagcgtttgcaggctgtgaatgggttcaagtcgctc
caagtccctgtcctaatttgcacggatttagcatccagaggtttggatattccaaaaatt
gaatttgttataaattatgatatgccaaagacatacgacatctatcttcacagagtgggc
cgtactgctagagctggtcgagaggggcgttctatttcatttgtgggagagtcatcacaa
gacagaaatgtagttaaaaatgccataaaatccgctgaagagaacaaaaaacaggatacg
gtagtgggcagaatggttgattgggctaaagttgaagagatcaacaaactgaccactaac
aaggatgatgtcatagcagagattttggaggaagaaaagcaagagaaagaaattctgaga
gcagagatggaagttcgtaaaggcgagaatatgctgaaacataaagacgaaatcagtgct
aggccaaggaggacgtggtttcagactgagggggaaaagaaaaactccaaagtcatccaa
gctttgtcgaagggcaagaagactgtgaatagcaagaaaaggaagagaatcgaggccact
gaagatcgctcgcgttcatacaaaaagactcagaaagatcgtggctccgaccaacagaga
acttatgcgaaacagaaggctaagaaggagatgaagaagaaaaagcaagccagaaagtaa
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