Lachancea thermotolerans: KLTH0B03586g
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Entry
KLTH0B03586g CDS
T01117
Name
(RefSeq) transcription factor IIF subunit TFG1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
lth
Lachancea thermotolerans
Pathway
lth03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLTH0B03586g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0B03586g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
KLTH0B03586g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
8290778
NCBI-ProteinID:
XP_002551945
UniProt:
C5DCJ6
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All DBs
Position
B:complement(288352..290331)
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AA seq
659 aa
AA seq
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MPNPLKSSNSASPFIKREQLRRDFLRSRLKKNGTPRPYVKKEDPEAYDERTRQLLSGGQS
HSGIKREEGSQYNEFPLRAVSHEQLENIRTHILKFQSKKKVDPQRDMHLPVRLHRKDTRN
LQFQLTRAEIVQRQKEIAEYKMKADSERNGGEQSQAGSSATNLQSDSNVASSAAQTPVET
PGDTPADTPVKQESVKEEHGSSSMAIKKEGADLPATKLEEAGVAEDPTKVGMVKYDGKEK
PLETESKEDPFADVAPDGGGRFRRGNTKRKTRQLKLLDENAKRLRFEEFYPWVLEDFDGL
NTWVGSYEAGNSDSYVLLSVENDGSFTMIPADKVYKFTARNKYATLTIDEAEKRMEKNGK
GIPRWLMKHLDDIGTTTTRYDRTQRKLRAVDARQGEEDDRNDNSEVELDFDEEFADDEEA
PIIDGDEKENKESEQRIKKEMLQANAMGLRDDDEEADDDLFGEKKIDDEGERVMKALQKS
DMAALYESDDESKSNPYLSESEGENTEEAKAKDENQENGKSSRKGSPKKKSSRGSPSGPR
IYVKSIKDFQLVLRADKSVLRNFPEGNWNPHAKDEKSRTPGAASSPSSPPIKIEDDIENP
DLLTERDIIDVVTGRQMTLKQLIKELKEKVAKHPSNKDRMKYLVKRLVRLNNGYLELNK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacccgcttaagtcctcgaatagcgcctcgcctttcatcaagagagagcagcta
agaagagactttttgagatctcgtctcaagaaaaacgggactccgcgtccatatgtgaag
aaagaggaccccgaggcatatgatgagaggacgagacagcttttgagtggtggtcagtca
cactctggcattaagagggaagaaggctcccagtataatgagttccccttgcgagccgtg
tcgcatgaacagctagagaacatcaggacgcacattctgaagttccaaagtaagaagaag
gtagatccccaacgagacatgcatctgcctgtcagattgcatcgtaaggacacccgtaat
ttacaattccagcttacaagagcggagatcgtgcaacggcaaaaggaaatagctgaatac
aaaatgaaagcagactctgagcgcaacgggggcgagcaaagtcaagccggtagctctgct
acgaacttgcaatctgattcaaatgttgcaagctctgctgcccaaacgccagtggagaca
cctggagatactccagcagacacacctgtaaagcaagagtcagttaaagaagaacatgga
tcatcaagcatggccattaaaaaggagggcgctgatttgccagccaccaaactcgaggaa
gcgggggttgcagaggatccgactaaggtcggaatggttaagtatgacgggaaggagaag
cctttggaaacagaaagcaaggaggatccgttcgcagatgtcgcaccagatggcggtggg
aggttcagaagaggcaacacgaaaaggaaaactagacaactgaagctccttgacgaaaat
gctaagcgcttaagattcgaagaattttacccatgggttttggaggacttcgatggactg
aacacgtgggttgggtcttacgaagctggtaactcggattcttacgtgctactcagtgtt
gaaaatgatggcagtttcacgatgattcctgcggacaaggtgtacaagttcacggcaaga
aacaagtacgcaaccttaaccatcgacgaggcagaaaaacgcatggagaagaatggaaaa
ggtatccctcgttggctaatgaaacacttggatgatatcggcacgaccacaacaagatat
gatagaacacagagaaaactacgcgcagttgatgcgcgtcagggtgaagaagacgatagg
aatgataactctgaagttgagcttgattttgatgaagaatttgccgacgatgaagaggcg
cccatcatcgatggcgacgaaaaagaaaataaggagtctgagcaaagaatcaagaaagaa
atgcttcaagccaatgcaatgggcctgcgtgatgatgacgaggaagcagatgatgatctt
ttcggtgaaaaaaaaatcgacgatgagggcgaaagagtgatgaaagcgctacaaaagtca
gacatggccgctttgtacgagtcagatgatgagtcgaagtccaacccatacctgtctgag
tcggaaggtgaaaatacggaagaagctaaggccaaagacgaaaaccaagaaaacggcaag
tccagtagaaagggatcacctaagaaaaaatcctctaggggttcccctagcgggccacgc
atatacgttaaaagtatcaaagactttcagcttgtactacgggccgacaaatcagttctt
cgcaactttccagaaggaaactggaatcctcacgcgaaagacgagaaatcgagaacaccc
ggagccgcttcttcaccttcgtctccccctatcaagatcgaagacgatattgaaaatccg
gacctcttgacagagagggatataattgatgttgttacaggacgccaaatgactctaaaa
cagctcattaaggagctcaaagagaaagtcgcaaaacacccatctaataaggatagaatg
aagtacttggtcaaaaggttggtaagactaaacaacggttatttggagcttaacaaataa
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