Lachancea thermotolerans: KLTH0B04466g
Help
Entry
KLTH0B04466g CDS
T01117
Name
(RefSeq) cleavage polyadenylation factor subunit RNA14
KO
K14408
cleavage stimulation factor subunit 3
Organism
lth
Lachancea thermotolerans
Pathway
lth03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLTH0B04466g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0B04466g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
KLTH0B04466g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
TPR_19
TPR_6
TPR_17
P4Ha_N
Motif
Other DBs
NCBI-GeneID:
8290818
NCBI-ProteinID:
XP_002551981
UniProt:
C5DCN2
LinkDB
All DBs
Position
B:360380..362344
Genome browser
AA seq
654 aa
AA seq
DB search
MSATPEIVKNGSAGFIRPTKRQIRPEEDVEGRLRDVIEERPGDICTYLELARLLQSRDQQ
EEARGVFDQLHERFPLFSPLWTVEVGYDLERDEFSHAGSLLTRCLSGTLENNDLGLWFMY
LDFVRRKNNLITGGEEARGVVLKAFDAVATKCASWEPRSSAFWNEYLSFLEHWKPVSKWE
EQQRIDLTRSLYKRMLCIPFDGLERSWNKYTQWEQEVNSLTARKFIGELSANYMKARSLY
REWNNITKGIKRVLPSRLSQCSKQTIPQPGEYQVEQIHLWMDWIKWELQNKLDLPDEFHS
QRVDYVYKQAIQHLLFSPEIWYNYSMYASPENAREILIQGLKASPGSTTLTFKLSEHFEL
QNEVEQMQKCFERCIDHLVLEYHIMSDEGQETYSQRQKITFVYCIYMNAMKRVSGLSSAR
KVFGKCRKLKDLLTHEIYIENAYLEFHNNNDHKTACKVLELGLKYFSSSGEYVNKYLDFL
ILINQDGLIKPLFESSLDRIIDLDELQRIYKKVINYESKFGNLTNAYSIENRFFEKFPQL
EKIEVFTDRYQVQNANLIKSLELTYLPSDNDFRFGSFNETNGGLKRSRGLSQSGDSAAQK
RHKSQDFVPENVLDLLRLLPKRQYFKTAVLDAEKLTRYLIENVNIPSSDNGTAA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcgacgccagaaatagttaaaaatggttccgctggctttataagacccaccaag
cggcaaataaggcctgaggaagatgtggaagggaggctcagggatgtgatagaagagcgg
ccaggagacatttgtacatatttggagctggcgagactgctgcaatccagagaccagcag
gaagaagcgcgcggtgtatttgaccaattgcatgagcgcttcccacttttttctcctctg
tggacggtggaggtgggctacgatctcgaaagagatgaattctcgcacgcgggaagcctt
cttacccgatgcttgtccgggaccctggagaacaatgaccttggtttatggtttatgtat
ctggacttcgtccgtagaaaaaacaatttaattacgggaggagaggaggcgcgcggcgtg
gtcctcaaagccttcgatgccgtggcgacaaagtgcgccagctgggagcctcggtcttct
gcgttttggaatgaatacctttcgttcctagagcactggaagcccgtaagcaaatgggag
gagcagcaacgcattgaccttacaaggtctttgtacaagcgcatgctgtgcattccattt
gacgggcttgaacgttcgtggaacaagtacacacagtgggaacaagaggtcaattcgctg
actgcaagaaagttcatcggtgagctttcagctaattatatgaaggcgcggtctttatac
agagaatggaacaatattaccaaaggcataaagcgggtcttgccttctcgcttgtcgcag
tgctccaagcagacaattccccaaccaggagagtatcaagtcgaacaaatacatctatgg
atggactggattaagtgggaactccaaaacaagctcgaccttcctgacgaatttcattcg
caaagagttgactacgtctacaaacaggctattcaacatctcttgttttcacctgagatt
tggtacaactattcaatgtatgcctccccagaaaatgcgcgggaaattttaatacagggt
ttgaaagccagtcctgggtcaacaactttaactttcaagctttcagagcactttgagctt
caaaacgaggtggaacaaatgcagaagtgttttgaacgttgcattgaccatttggtgttg
gaataccacataatgagcgatgaggggcaagagacctacagtcaaagacaaaagatcact
tttgtttactgtatatacatgaacgcgatgaaaagggtatccggtctttcatctgcgcgc
aaagtttttggcaagtgccgtaaactcaaagacttgctgacacacgaaatatacatcgaa
aacgcttacttggaatttcacaacaataatgaccataaaactgcatgcaaggtcctggag
ctaggactaaagtacttttcgagtagtggagagtacgttaacaagtacctagatttcctg
attttaattaaccaagacggcctaatcaaaccgcttttcgaaagttccctagacagaata
atcgatcttgatgaattacagaggatttacaagaaagtgataaattacgagtccaagttc
ggaaacctcacaaatgcatattctatcgaaaaccgattttttgagaagttcccacaacta
gagaagatcgaagttttcacggaccgctaccaagttcagaatgccaacttaataaagtca
ctggagctcacctatctgccaagtgacaacgactttaggtttggttcattcaacgaaact
aatgggggcctcaaaaggtctcgcggactctcacaatccggagattcagctgcacaaaag
aggcacaagtctcaggattttgttccagaaaatgtcctcgatcttctgagactgttaccc
aaacgccaatacttcaaaaccgcggttctggatgccgaaaaattgacgcgttacctaatt
gaaaacgtaaatataccatcaagcgacaatggcactgctgcgtaa
DBGET
integrated database retrieval system
