Lachancea thermotolerans: KLTH0B06512g
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Entry
KLTH0B06512g CDS
T01117
Name
(RefSeq) GTPase RIA1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
lth
Lachancea thermotolerans
Pathway
lth03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KLTH0B06512g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0B06512g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
Pre-60S particles
GTPases
KLTH0B06512g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFG_C
EFL1
EFG_III
GTP_EFTU_D2
EF-G_D2
EFG_IV
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
8290911
NCBI-ProteinID:
XP_002552072
UniProt:
C5DCX3
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All DBs
Position
B:523580..526882
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AA seq
1100 aa
AA seq
DB search
MSRVGPETSKRLQKDPSCIRNICILAHVDHGKTSLSDSLLASNGIISQKLAGKVRFLDSR
PDEQLRGITMESSAISLYFRVLRKQEGKDEPLVNEHIINLIDSPGHIDFSSEVSAASRLC
DGAVVLVDVVEGVCSQTITVLRQCWIEKLKPVLVLNKIDRLVTELQLTPQEAYVHLNKII
EQVNSIIGSFFNGQRLLDDLSWREQLENNTNAEFVEKDDTDIYFKPENNNVVFTSAVDGW
GFNIGQIAKFYESKLGAKRENLQKVLWGDFYIDPKTKKFINSKGLKGRTLKPLFVSLILD
NIWKIYNNVLVERNADVLEKITQTLNIKVSQRDLRSKDLKNLLRTIMGQWLPVSTSILLT
VIEKVPSPLESQSEKMEIIIGNAPGSDLIDKGLYKSMESCDKDGPVCAYVSKMLSIPKEE
LPINNGKPLSQGELMERSRAAREQALKAAKAAELAESLSRTNASKDEGRGFYERAQETVA
TPQLGTANHSADNTTSKPSETDTFKIVNEPAQEFDLGLDLGDEDYEDEDDINLEPEFSPA
VIDPNDPLSSMFEYEEEDPFETNNEAELEEDDAGDFEESDEVMIGFARLYSGTLKVGQKV
SVLGPKYDPRFPADHIEQVEITDLFIFMGKELVPLTECPPGNIVGIGGLAGKILKNGTIV
DPQVQGANLAGVNLHVTPIVRVALEPTNPTQMGRLARGLKLLDQADPCVQTYVEDTGEHI
LCTAGELHLERCLKDLRERFAGIGITSSKPAIPYKETFLSTSDMNPPKNAELGRGVCQRY
LGEYAFKFRSAPLPENITQYLTEQEANIKSLVEEKQQSNESSEFSKNLKNLFTEAAAKNK
IWDQCNSCISAFGPKRAGPNILIAENVLSGQKDGEETSDTFEYKSSIINGFELAVSGGPL
AKEPVSGMCVIVEDIHKMSQEEIDQLEVQNYQAEVPNFSGRLITTARDIIHSTFLDWSPR
IMWAMYSCEIQASVEVLGKVYAVVQQRRGKIVSEEMKEGIPLFQIEAQIPVVEAFGFSED
IRKKTSGAAQPQLVFAGFECIDLDPFWVPTTEEELEELGDTADKENIARKHMNMIRRRKG
LFVDEKIVQNAEKQRTLKRN
NT seq
3303 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagttggccccgaaacttcaaaaaggcttcaaaaggacccctcatgtatccga
aacatctgtattcttgctcacgttgaccacggaaagacgtcgctttcagactcgctttta
gcatccaatgggatcatctcccaaaagctagcaggaaaggtgaggtttttggactctcgg
cctgacgagcagttgcgagggatcactatggagtcgagcgctatttctctttacttcaga
gttttacgcaagcaggagggaaaggacgagcccttagtcaatgaacatataatcaacttg
atagattcccctggccatattgatttttccagtgaggtcagcgcggcttctagactttgt
gatggtgctgtggttctggtcgatgtggtagaaggggtgtgctcgcaaactataactgtc
ttaagacagtgctggatcgagaaactgaaaccagttttagttctcaacaaaattgacaga
ttggtaacagaactacagctaacacctcaagaagcttacgtccacttaaacaagattatc
gagcaggtaaattccattattggctcctttttcaacggacagcgactactggacgatcta
tcatggagagagcagcttgagaacaacacaaatgctgagtttgtcgagaaagatgataca
gatatttatttcaagcctgaaaacaataacgtcgtattcacttcagctgttgatggctgg
gggttcaacattggccagatagccaagttctacgagagtaagttgggggctaaaagggaa
aacttacagaaagttctttggggtgacttttatatcgacccaaagaccaaaaaattcata
aacagtaaggggctcaaaggcagaactctgaaaccgttgtttgtcagtttgattctagac
aacatctggaaaatctacaacaatgtcttggtggagagaaacgcagacgttcttgaaaag
ataacgcaaactcttaacattaaggtttctcaaagagatttgcgttctaaagatctcaaa
aacctactgcgtactatcatgggtcaatggctccctgtcagtacatccattctcctcact
gtaattgaaaaagttccctcccctctcgaatcacagagtgaaaagatggagattatcatt
ggtaatgctccaggatcagatctcattgacaaggggctttacaagtctatggaatcttgt
gacaaagatggtccagtctgtgcatatgtatctaagatgctttcaatccctaaagaggag
cttccaatcaacaatggaaagcccttatctcagggtgaattgatggaaagaagcagagca
gctcgcgaacaagctttgaaggcagcgaaggccgcagagctcgcagagagtctttctcgc
acaaacgcttccaaagatgagggccgtggcttttatgagagagctcaagagactgtggct
acgccacaattaggtacagctaaccatagcgcggataatactacttcaaagccctcagag
actgatacattcaagattgtcaatgagcccgctcaagagtttgatttgggtcttgatctc
ggtgatgaagattatgaagatgaggacgatattaacttagaaccagagtttagtcctgct
gttatcgaccctaatgaccccttgagctcaatgtttgagtacgaggaagaggatcccttt
gaaacgaataatgaggctgagttagaagaagatgatgcaggtgatttcgaggaaagtgac
gaagtcatgataggctttgcaaggctttatagtggtacgttaaaggtagggcagaaagtt
tccgtacttggtccaaaatacgacccacgctttcctgctgatcacatcgaacaggtcgaa
atcaccgatctattcatctttatgggtaaagagttagtgcccttaactgagtgcccacca
ggtaatatcgttggcattggcgggcttgctggaaagatattgaaaaacggaaccatagtg
gatccacaagttcaaggtgccaacttagcaggcgtgaatttgcatgtcacccccatcgtg
cgagtggcgctcgagcccacaaatccgacccaaatgggcaggttagctcgcggtctgaaa
ttgctagatcaggccgacccttgtgttcaaacatacgtcgaagacactggtgagcatatc
ctatgtactgcaggtgagctgcatttagaaagatgtttgaaagacctgagggagaggttc
gcggggattggcataacttcttcaaaaccagcaatcccttacaaagaaacattcctctca
acttctgacatgaatcctccaaaaaatgcggaactcggaagaggcgtgtgccaaagatac
ttaggcgaatacgctttcaagttcagatccgcgccacttcctgaaaacatcacacagtat
ttgactgaacaggaggccaacatcaagtctctcgttgaagaaaagcagcaatcaaatgaa
agcagcgagtttagcaaaaacttgaaaaacctcttcactgaagctgccgccaaaaacaaa
atatgggatcagtgcaactcgtgcatatcggcgtttggccccaagagagcggggcccaat
attttaatcgcagagaacgtgctatcagggcagaaagatggagaagaaacatcagacaca
tttgaatacaagagttcaattatcaatggttttgagcttgcagttagcggggggccactg
gctaaagagccagttagcggaatgtgtgttatagtcgaggacatccacaaaatgagccag
gaggagatagatcagttagaagttcagaactaccaagctgaagtgcccaacttttcaggt
agattgattactaccgctagggatataatccattccacttttcttgactggtctccacgt
atcatgtgggctatgtactcgtgtgagatccaagcttccgttgaggttctcggtaaggta
tacgcagtggttcagcaaagacgtggtaaaattgtatcagaggagatgaaggagggaata
cccttattccaaatcgaggctcaaatcccagtcgttgaagctttcgggttcagcgaggac
attcgtaagaaaacatcaggtgctgctcaacctcaactggtatttgcaggcttcgaatgt
attgatctagatccgttctgggtgccaaccactgaggaagagttggaagaattgggcgac
actgctgataaagagaacatagcaagaaaacatatgaacatgataagaagaagaaagggt
cttttcgtggacgagaaaattgtccagaacgctgagaagcaaagaacgttgaagcgcaac
tga
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