Lachancea thermotolerans: KLTH0B08998g
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Entry
KLTH0B08998g CDS
T01117
Name
(RefSeq) ATP-dependent RNA helicase HAS1
KO
K13179
ATP-dependent RNA helicase DDX18/HAS1 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0B08998g
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0B08998g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0B08998g
Spliceosome [BR:
lth03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
KLTH0B08998g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Helicases
KLTH0B08998g
Pre-60S particles
KLTH0B08998g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
ERCC3_RAD25_C
SecA_DEAD
Motif
Other DBs
NCBI-GeneID:
8291020
NCBI-ProteinID:
XP_002552177
UniProt:
C5DD78
LinkDB
All DBs
Position
B:complement(731722..733200)
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AA seq
492 aa
AA seq
DB search
MGEVEEKAHSKKRSADAVEASENDGYKEKFAELNLSPPTMKAIDKMGFTTMTQVQSRTIP
PLLAGRDVLGAAKTGSGKTLAFLLPAIEMLHSLKFKPRNGTGVIVITPTRELALQIFGVA
KTLMEFHSQTFGIVIGGANRRQEADKLAKGVNLLIATPGRLLDHLQNTKDFVFKNLKALV
IDEADRILEIGFEDEMRQIVKILPSEERQTMLFSATQTTKVEDLARISLRPGPLFINVDS
EKQTSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVRYYAELLNYIDL
PVLELHGKQKQQKRTNTFFEFCNAERGTLVCTDVAARGLDIPAVDWIIQFDPPDDPRDYI
HRVGRTARGSKGKGKSLMFLTPNELGFLRYLKAAKVPLNEYEFPSNKIANVQSQLEKLIK
SNYHLHQIAKDGYRSYLQAYSSHSLKTVYQIDKLDLAKVAKSYGFPIPPKVNITIGASGK
TPPSKKRKPSRN
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgggagaagtggaagaaaaggcgcactccaagaagagatccgcggacgccgtcgaggcg
tctgagaacgacggctacaaggagaagtttgcagaactcaacctgtcacctccaacgatg
aaggccatcgacaagatgggcttcaccacgatgacacaggtgcagtcccgtaccatccca
ccactgcttgctggtcgggacgtgctgggtgccgccaagaccgggtcaggcaagacgctg
gctttcttgttacccgcgatcgaaatgctgcactcgctgaaattcaagcccagaaacggg
acaggcgtcattgtaatcacgccaacgcgtgagctggcgctccagatcttcggcgtcgcc
aagaccctgatggagttccactcgcagacgtttggcatcgtgatcggtggtgccaaccgc
cgccaagaggccgacaagcttgcgaagggcgttaacctgctcatcgcgacgcccggtcgt
ctgttggaccacttgcaaaacaccaaggactttgttttcaagaacctgaaggcgctggtg
atcgacgaggcggaccgtatcctggaaatcggtttcgaggacgagatgcgccaaattgtc
aaaatcttgcctagcgaggagcgtcagaccatgctgttttccgcaacacagaccaccaag
gttgaggaccttgcgcgtatctctttaagaccaggacctctgttcatcaatgtcgactcg
gaaaagcagacctccacggcagacggtctcgagcaaggatacgttgtctgtgacagcgac
aagcgttttctgctgctattctctttcctgaagcgcaatcagaagaagaagatcattgtg
tttctgtcatcatgtaactcggtccggtactacgcagaactgctcaattacatcgacctg
cctgtgctcgagctccacggcaagcaaaagcagcagaaaagaactaacacgttctttgag
ttttgcaacgctgaaagaggaactttggtttgtaccgatgttgctgctagaggcctggat
atcccagctgtggactggattatccaatttgaccctccagatgacccaagagactacatt
cacagagtgggtagaaccgccagaggctccaaaggtaagggaaaatctctgatgtttttg
actcccaacgagctcgggtttttaagatacctgaaggccgccaaggtgccgctcaacgaa
tacgaattcccctctaacaaaattgcgaatgtgcagtctcaacttgagaagttgataaag
tccaactatcatctccatcaaatagctaaggatggttatagatcatacctacaggcatac
tcatctcactctttgaaaactgtgtatcagatcgacaaattggatctcgcgaaggtggcc
aaatcctacggcttccccattccaccaaaagtgaacatcactatcggggcttcaggaaaa
acaccaccaagcaagaagaggaagccttccagaaactaa
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