Lachancea thermotolerans: KLTH0C07458g
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Entry
KLTH0C07458g CDS
T01117
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP6
KO
K12855
pre-mRNA-processing factor 6
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0C07458g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0C07458g
Spliceosome [BR:
lth03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
KLTH0C07458g
Complex C
U5 SnRNP specific factors
KLTH0C07458g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
TPR_2
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
TPR_11
TPR_17
Sel1
ARM_TT21_C
Motif
Other DBs
NCBI-GeneID:
8291419
NCBI-ProteinID:
XP_002552548
UniProt:
C5DE99
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Position
C:642381..645116
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AA seq
911 aa
AA seq
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MERPAFLSQKPPPGYVAGIGRGAIGFTTRSDIGSGKTPGRVADDREQGVNPGGPEDTEDA
ETKARINRNQRFEDTNGLSLVSHGLEPDDKDADRIYDEVEARLARKRVHKKLDVEKASSG
NSQGGFLAASQQFVDLKRSLATVSEEQWDNLPEAGDITRRNKRQRLEMQNERKSYAAPDT
LVSGNIDLTKLTQEREKLLGRQLDESISSSATGINDPKDAVEKYLEELDNSTHLANLDEQ
AQDLRKTRAILASYRKADPKKPQGWIASARLEEKANKFRLAKNLIEEGCNECPYDANIWL
ENIRLNSSDLRYCKILVANALRFNEESLELWLKAIDLEREPLNKVRVLRKAIQSLPTSEK
LWKLAVQYENDKQEAIKILQKATELLPHSIPLITALVNLQEHTVARQTLNTARRNNPTTF
HMWMLALQLEERHSEASVDKLIKLALKGATELSKNGITIKFEKWLQEAAKIELDFPGVYQ
NTVQAVVETSVQLFYHSEPLSDLLEAIENIASQCFNTKRSAYCCLLEKDPLDMSLWTKVI
KHCQAQSKLDEVYRLFEKLLFSDSNEVLRKNSVLALMYSKLLWKSETSIEKALEVLDKSL
KVDPLNVEFWLAKAKLLVNARKFEAAENLYKDGVIKLSQQPGLERVFYRYVSFLRFQNRN
EEALKLLETDFLQRAHGCEKLYLQWGQIYVHLGDLPQAQKCFAAGVKELPTSANLWIALA
HTDKDQVGSAKARSDYDIALLKVPREKSEILLVSRIHLEKGLGNLDQARLLVTQALRDFP
ASSLLWVEHLRLLNKKSLRKTAYQDALKSTNSGPRVLVEIGCHLFGESSYEKALKWFQKA
ASASPLYGDAWIWICRCYKKLERDPSSIFSEVEDIEPRYGPEWVKRSKDVNNLTLSPAQV
LSQCTSHDQKS
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atggagaggccggcgttcctgagtcagaaaccgcctcctggctatgttgctggtattgga
agaggtgctattggttttacaacacgctccgatatagggtcagggaagacgcccggcaga
gtagcagatgacagagaacaaggcgtaaatccgggtggcccagaggatacagaagatgca
gaaacaaaagccagaatcaatcggaaccagcgctttgaagataccaatggtctctctttg
gtctcgcacggattggaaccggacgataaagatgcagatagaatatacgatgaggttgag
gcccgcctcgcaagaaaacgcgtgcacaagaagttagacgtcgaaaaggcctcgtctggt
aactcgcaaggaggatttttggcggcgtcccagcagttcgttgacctgaagcggtctcta
gccactgtgagcgaagagcaatgggacaacttaccggaggcgggagatatcacacggcgc
aacaagcgccagcggctcgagatgcaaaatgaacgcaagtcttacgctgctcctgataca
cttgtctctggtaatatagacctcacaaaactgacgcaggagcgtgaaaaattgctgggc
cgtcagctggatgaaagtataagttcatcggctactggtataaatgaccctaaggatgca
gttgaaaagtacctagaagagctggacaattcgacgcacttggcgaacttggatgaacaa
gcccaggacctacgaaaaacgcgcgctatcctagcctcataccgcaaagctgaccccaaa
aaaccgcaaggctggatagcgtccgcgagactcgaagagaaggccaataagtttcgttta
gccaaaaaccttatagaagagggatgtaacgaatgcccttatgatgcgaatatctggctt
gagaacatacggcttaattcttctgacctgcgttactgcaagatactggttgccaatgcc
ctccgattcaatgaagaaagtcttgaactttggctaaaagccattgatcttgagagagaa
cctctgaacaaggtgcgtgttttgcgcaaagctatacaaagtttacccacatcggaaaaa
ctgtggaagcttgcagtgcagtatgaaaacgacaaacaagaagcgattaagatattgcaa
aaagccacagagctgttgccacacagcataccacttattaccgccttagttaatttgcaa
gagcatacagtggccagacagaccctaaatactgctagacgcaacaaccctactacattc
cacatgtggatgttggctctgcagttagaagaaagacacagtgaggctagtgttgataaa
ttgatcaaacttgccttgaaaggcgccacagagctatcaaagaatgggataaccatcaag
tttgaaaaatggcttcaagaagcagcgaaaattgagcttgactttccaggggtttaccag
aacactgtgcaagctgttgtagaaacatccgtgcaactgttttaccattctgaacccctt
agtgatttattagaggctattgaaaatattgcttcacagtgttttaacaccaaacgttca
gcatattgttgcttgcttgagaaagatcctctggacatgagcctatggacaaaggttatc
aagcactgccaagcccaatccaagcttgacgaggtgtatcgtctcttcgagaaattgcta
ttttcagattctaacgaagtattacgcaagaactcggttttggcattgatgtattccaaa
cttttatggaaatcggagacaagcattgaaaaagctctcgaagttcttgataaaagtctc
aaagtggaccctctgaatgttgaattctggctcgccaaagccaaactcttggtgaatgcc
aggaaatttgaagcagcggaaaacctttacaaagacggtgttattaagctgtcacagcaa
cctggcttggagagagttttttaccgttacgtcagcttcttgcggttccaaaaccgcaat
gaagaggcgctgaaattactggaaacagactttttgcaacgcgcccacggatgtgaaaag
ctgtatttgcaatggggtcaaatatatgtgcatcttggagatctgcctcaagcccaaaag
tgttttgcggccggtgtaaaagaattacctaccagtgcaaacttgtggatcgcgctcgca
catactgacaaagatcaagttggttcggccaaggcgcgctcggattatgatatcgcattg
ttgaaagtccctcgcgagaaatcggaaatacttcttgtttcacgaatccatctcgaaaaa
ggccttggaaatttggatcaggcgcgcttgttggtaacgcaggcgctaagagatttccca
gcaagctcgctcctgtgggtcgagcatttaagacttctcaataaaaaatctttgagaaaa
accgcttatcaagatgcacttaaaagcaccaattcaggccctagagtcttggtggagatc
ggttgccatctttttggcgaatcgagctacgagaaagctctcaaatggttccaaaaagca
gcgtctgccagtcctctttatggagacgcctggatatggatttgtcgctgttacaaaaaa
cttgaaagagacccttcatctattttttcggaagttgaagacatagagccacggtatggt
cctgagtgggtcaaaagatctaaggatgtcaacaatttgaccttgtccccagctcaagta
ctgtcccagtgtacgtcacatgatcagaaatcatga
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