Lachancea thermotolerans: KLTH0C07634g
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Entry
KLTH0C07634g CDS
T01117
Name
(RefSeq) KLTH0C07634p
KO
K10570
DNA excision repair protein ERCC-8
Organism
lth
Lachancea thermotolerans
Pathway
lth03420
Nucleotide excision repair
lth04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
KLTH0C07634g
09124 Replication and repair
03420 Nucleotide excision repair
KLTH0C07634g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lth04121
]
KLTH0C07634g
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0C07634g
Ubiquitin system [BR:
lth04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
KLTH0C07634g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
KLTH0C07634g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WDR55
Beta-prop_EIPR1
ANAPC4_WD40
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_Nup120_160
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR11_1st
PAN2_N
Motif
Other DBs
NCBI-GeneID:
8291427
NCBI-ProteinID:
XP_002552555
UniProt:
C5DEA6
LinkDB
All DBs
Position
C:654087..655364
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AA seq
425 aa
AA seq
DB search
MNRTQLQWQLGKLDNRRLYDLVLCSELEKLRDAKPIVYSHRKASFPIGTTSLDFDSTGQF
LLSSGEDGSLALWALDEGHSEGKLVNKRIQFAAGESKESVNPSSRRVHVTARSPGGKAPR
FLTSVESRPPDSLQGPREASHAFSVTSVKWYGPDNGLFFTGSNDHKVKIWDTNTFQVASS
IDIAHRVAQLDTLGDLLAVASEDSHPRLIDLRSMSAAISLGVKRSDMRHGINAAKFSHTS
SGAKPLLLATGDDDGNVRVWDLRMGNRWLCDLTEADTLSKSHARCCNDLCWDPSGSLKLV
TTGNDGKCKMWDLHEGGAKPQLVRQLGATDLTSNRFRRRTSHYLMWQGPYVFFNSDHGEI
LVYQSHSGLLWHAFEYPLRVAQPERLRSTPKLQSMAIQTRLANTLGVRLVLGTDNTHGRI
LEYRV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaactcagcttcaatggcaacttggaaagcttgataacagacggctgtacgac
ttagtactatgcagcgagctggaaaagctgagagatgcaaagccgattgtctactcacat
agaaaggcctcgtttcccattggaaccacatcactcgatttcgattcgacaggccagttt
ctattgtccagcggggaggatggaagtttagccctctgggctctcgacgagggccatagc
gaaggaaagctagttaataagcgcattcagtttgcggcaggagagtcgaaggaatctgtg
aacccatcatcccgccgggtgcacgttacggcacgaagtcccggcggaaaagccccgcgc
ttccttacatcagtggagtctcgcccaccagactccctgcagggtcccagggaagcatcg
cacgcgttttctgtgactagcgtgaagtggtatggacccgacaacggtctcttcttcaca
ggtagtaacgaccacaaggttaaaatctgggacactaacaccttccaagtggcaagctcc
attgatattgctcaccgggtggctcagctggacacactaggtgatcttcttgctgtcgcc
agtgaagattcgcacccccggctgatagatttaagatcaatgagtgccgccatatcactg
ggcgtgaagcgctccgacatgcgtcacggcatcaacgctgcaaaattctcacacacgagt
tcaggtgcgaagcctcttctgcttgccactggcgacgacgacggcaacgtccgcgtttgg
gacctgcgcatgggcaaccgctggctgtgcgatctcaccgaggcagacaccctttcaaag
tcgcacgcgcgctgttgcaacgacctgtgctgggacccgagcggctcgctaaagcttgtc
accacgggaaacgacggtaaatgcaaaatgtgggatcttcacgagggcggcgccaaacct
cagcttgtgcgtcagctcggtgccacggaccttacgtccaaccggtttcgtcggcgcacg
tcccactacctcatgtggcaggggccctatgttttttttaacagcgaccacggcgaaatc
ctcgtgtaccagagccatagcggtcttctgtggcatgcatttgagtacccgctgcgcgtt
gcgcagcccgaaaggctccgatcaaccccgaagctacaaagcatggccatccagacccgt
cttgccaacacgctgggcgtgaggctcgttttgggtacagacaatacacacggaagaatt
ctggagtatcgagtgtag
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