KEGG   Lachancea thermotolerans: KLTH0C08426g
Entry
KLTH0C08426g      CDS       T01117                                 
Name
(RefSeq) KLTH0C08426p
  KO
K14328  regulator of nonsense transcripts 3
Organism
lth  Lachancea thermotolerans
Pathway
lth03013  Nucleocytoplasmic transport
lth03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    KLTH0C08426g
   03015 mRNA surveillance pathway
    KLTH0C08426g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0C08426g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     KLTH0C08426g
   mRNA cycle factors
    P-body specific factors
     KLTH0C08426g
SSDB
Motif
Pfam: Smg4_UPF3
Other DBs
NCBI-GeneID: 8291463
NCBI-ProteinID: XP_002552589
UniProt: C5DEE0
LinkDB
Position
C:complement(712136..713311)
AA seq 391 aa
MDERPQNGAEQNLKKHQGRKQAGKGHQTPKKPKPEAVGLNTSTNSKSKKKYRKSKDAAVR
SSAQYKLVLRQLPPNLMEEQFFDTVSAAVGSDFLQQHVEDRYFFKGHFSRKPFKLPTYSR
AYMTFNEAEKLQFFAKSVSAVTFVDDTNNSMVPTVTLSPYLKKLRTEESKGLRKTKDLIE
GTIEQDRTFQTFLKSLDLLENHKQEYQYADLSVIMPLEKALRRKLEEEARVKAQGEKAMI
ALAGQVAKETTKAKKKKKKKKNKAATEGTEVKKKRPQSTTASTSQEKQNMVIIEAAGRRE
LQRRERIKKKSEIKEKKAAAANSANPADANVSKAASVKAKGKAAKKNKNKRPNSKNKKKN
EAKDKTADASSDKSVPKTKPKPKPQKKESNE
NT seq 1176 nt   +upstreamnt  +downstreamnt
atggatgaaaggccccaaaatggagctgagcaaaacctgaaaaagcatcaagggcggaaa
caggctggaaaaggtcaccagacccctaagaagcccaaaccagaagcagtcggacttaat
actagcactaattctaaatcaaagaagaagtacagaaagtcgaaagatgccgctgttcgc
tcctcggctcaatataagctagtgttgcggcaactgccgcccaatttaatggaggagcag
tttttcgacactgtttctgcggcggtaggctcggattttttgcagcaacacgttgaggac
cgttacttcttcaaagggcacttttccagaaaacccttcaagctgccgacttactctcga
gcttacatgaccttcaatgaagccgaaaagctgcaatttttcgctaaatcagtcagcgcc
gttaccttcgtggacgataccaacaactccatggttcccacagttacactgagcccttac
ttgaaaaaacttagaaccgaagaaagcaagggcttaagaaagaccaaggatttaattgag
gggaccattgaacaggacaggacattccagacgttcttaaagtccttagaccttttagaa
aatcacaagcaagaatatcaatatgcagatctaagtgtcatcatgccgcttgaaaaggcg
cttcgccgcaagctggaagaagaggcacgggttaaagcccagggcgaaaaggctatgatt
gcactggctgggcaggtggcgaaggaaacgacaaaggcgaagaagaaaaagaagaagaag
aagaataaagccgctactgaggggacggaagtcaaaaagaaaaggcctcaaagcacaact
gcaagcactagccaagagaagcagaacatggtaataatcgaagctgcgggcagacgagaa
ttgcaaagaagagaaaggatcaaaaagaagtccgaaatcaaagagaagaaggctgcagcc
gcaaattcagcaaatcctgcagacgccaatgttagcaaagcggcttctgttaaggctaaa
ggtaaagcagccaagaagaacaagaataagcggccaaactctaaaaacaagaagaaaaat
gaggccaaggacaaaactgcagatgcttccagcgataaaagtgtgcccaaaacaaagcca
aagccgaagccccaaaagaaagagtctaacgagtga

DBGET integrated database retrieval system