KEGG   Lachancea thermotolerans: KLTH0C09988g
Entry
KLTH0C09988g      CDS       T01117                                 
Name
(RefSeq) mismatch repair ATPase MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
lth  Lachancea thermotolerans
Pathway
lth03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    KLTH0C09988g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0C09988g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     KLTH0C09988g
SSDB
Motif
Pfam: MutS_V MutS_III MutS_II MutS_IV MutS_I AAA_27
Other DBs
NCBI-GeneID: 8291533
NCBI-ProteinID: XP_002552653
UniProt: C5DEK4
LinkDB
Position
C:825726..828593
AA seq 955 aa
MSSSRPELKFFDISEERGFYKRFSTLPEKPPKTIRIVDKGEYYTVVGNDALFVADNVYHT
NSVLKDCRIDPSTAKSIQEPLKYVTISSQVLSGLLKLCLLEQGMKVEIYDKSWKLLRNGS
PGNIEQVDDLMNISLDSSIVLTSIKIQPNAQEGNCVLGVSFIDSSSYKIGMLDIVDNEVY
SNLESFLIQMGVKECLLPDLRSNETVANELKKMVGVLDRCGCVSTFVKNSDFSHRDVDQD
LVKLVGDELSMSLMKFSNLALGSCNALLSYLQLLNDESQLGRYELVQHSLTEFMKLDASA
LKALNIFPTGPSGASGVSVSHGGGSGGKVSSIFQLLNKCKTNAGVRLLNQWLKQPLTDLQ
AIQNRHDLVEFLIDQLELRQVLQSDYLPLVPDVRRLTKKLNKNGGLEDVLKIYQFARKIP
EVSQVLEDYLGNMDGGDSIKPLVTETWLQPLNAHITPLDKFQEMVETTVDLEAYEDTNEF
MIKVDFNEDLAKIRGELDALKDNIKSIHLDAAEDLGFDPEKKLKLENHHMHGWCMRLTRN
DGKALRQHRKYLELTTVKAGIYFSTRELKQIAEQTAILQKEYDRLQYDLVKEIVQITLTY
TPVLEKLSIVLANLDVLSAFAHVSSYAPIPYVRPQMHGLGTQRKTELIGSRHPVLETLDD
VTFISNDVRLESGKSEFLIITGPNMGGKSTYIRQVGVISLMAQIGCFVPCDTAEIAVVDA
VLCRVGAGDSQLKGVSTFMVEMLETASILKNATENSLIIVDELGRGTSTYDGFGLAWSIS
EHIARNVRCFALFATHFHELTSLADQVPTVQNMHVIAHIEDARASTHSADDITLLYKVEP
GISDQSFGIHVAEVVQFPAKLVSMAKRKAAELEDLKHDSQALKRQKCSAGEIAEGTRVLK
DVLKAWAAAVRAEGLHEKLSDDESQARVLELLNQVSAASAQTDNKFMKEIAELLM
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgtcatcgagtcgccccgagctgaagttctttgatatctcggaagaacgaggattttac
aagcgcttctcgaccctaccagaaaagccaccgaaaaccatcagaatcgtcgacaagggc
gagtactacacggttgttgggaatgacgcgctgtttgtcgcggacaatgtttatcacaca
aattctgtgttgaaggactgtcggatcgacccaagtacggcgaaatcaatccaagagcca
ttgaaatacgttacaatctcttctcaagtactctcaggattgctgaaactgtgtctactg
gagcaaggaatgaaggttgagatctatgacaaatcctggaagctgctcagaaacggatca
cccggaaacatcgagcaggttgacgatttaatgaacatctcattggattcgtcaattgtt
ctgacaagtatcaagattcagcctaatgcccaagagggcaattgcgtcttgggcgtctcc
ttcatcgatagtagctcttacaaaattggcatgttggatattgtggacaacgaagtctac
tctaacctggaaagttttctcattcagatgggtgtgaaagaatgcttgctgccagatttg
agaagtaacgaaactgtggccaacgaactgaaaaagatggtgggcgtgctggaccgttgc
ggctgcgtttcgactttcgtcaagaactcggacttttctcacagggacgtggatcaagac
ctggtaaaactggttggcgacgagctttccatgtctttgatgaagttttccaatctggca
cttggatcgtgtaacgctttgctgagttatcttcagttgctgaacgacgaatcccagctt
gggaggtacgagctggttcaacattctttgacggagttcatgaagctggacgcgtcggca
ctcaaggccctcaacatcttcccaacaggccccagcggggccagtggagtgtctgtcagc
cacggcggcggaagcggaggaaaggtttccagtattttccagctgctgaacaagtgcaag
accaacgccggcgtacggctactcaaccagtggttgaaacagcctctaacagaccttcag
gccatccaaaacaggcacgatctcgtggagtttttaatcgaccaacttgagctgagacaa
gtgctacagtctgattacctgcccttggtcccggacgttaggaggttgaccaagaaactg
aataaaaacggcggtctcgaagacgtcttgaagatctaccagtttgctcggaaaatccca
gaggtctctcaggttctggaagactacttgggcaacatggacgggggcgactccatcaag
cccctcgtgacggagacgtggctccagccacttaacgcgcacataacgcccctcgacaag
tttcaagagatggtggagactacggtcgatctcgaagcgtacgaagacactaacgaattt
atgataaaggtcgacttcaacgaggacctggccaagattcggggcgagctggacgccctc
aaggacaacatcaaaagcatccacttggatgcagcagaggacctgggcttcgaccccgag
aagaagctcaagctggagaaccaccacatgcacgggtggtgtatgcgactgaccagaaac
gatggaaaggcgctccgtcagcacaggaagtacctggagctgaccacggtgaaggcgggc
atttacttcagcaccagagagctcaagcagattgctgagcagaccgcaatcctgcagaag
gaatacgacaggctacagtatgacctcgtgaaagagatcgtgcagatcacgctcacatac
acgccggtgctggagaagctgtccatcgtgctggcaaacctggacgtgctgagcgcgttc
gcgcatgtgtcgtcgtacgcgccaatcccatacgtgaggccccagatgcacgggctgggc
acgcagcgcaagacagagctgatcggctcgcggcacccggtgctggagacgctggacgac
gtgacgttcatctccaacgacgtgcggctggagagcggcaagagcgagttcctgatcatc
accgggcccaacatgggcggaaagtccacctacatccggcaggtgggcgtgatctcgctg
atggcgcagatcgggtgctttgtgccctgcgacactgcggagatcgcggtcgtggacgcg
gtgctgtgccgtgtgggcgcgggcgactcccagctcaagggcgtgtccacgttcatggtc
gagatgctcgagaccgcgtccatcctgaagaacgccacggagaactcgctgatcatcgtg
gatgagctgggccgcgggaccagcacctacgacggcttcggcctggcctggtccatctcc
gagcacatcgcccgcaacgtgcgctgcttcgcgctcttcgcgacccacttccacgagctc
acctcgctcgcggaccaggtgcccaccgtccagaacatgcacgtcatagcccacatcgag
gacgcccgcgccagcacccacagcgccgacgacatcaccctgctctacaaggtcgagccg
ggcatctccgaccagtccttcggcatccacgtcgccgaggtcgtgcagttcccggccaag
ctcgtgtccatggccaagcgcaaggccgcagagctcgaggacctgaagcacgattcccag
gctctgaagcgccagaagtgctctgcgggcgagatcgcagagggcacccgcgtgctgaag
gacgtgctcaaggcctgggccgccgcggtccgcgccgagggcctgcacgagaagctctcc
gacgacgagagccaggcccgcgtgctggagctgctgaaccaggtctccgccgcctctgcc
cagacggacaacaaattcatgaaggaaatcgctgaattgctaatgtga

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