Lachancea thermotolerans: KLTH0C10604g
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Entry
KLTH0C10604g CDS
T01117
Name
(RefSeq) E3 ubiquitin-protein ligase HRD1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
lth
Lachancea thermotolerans
Pathway
lth04120
Ubiquitin mediated proteolysis
lth04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
KLTH0C10604g
04120 Ubiquitin mediated proteolysis
KLTH0C10604g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lth04121
]
KLTH0C10604g
Enzymes [BR:
lth01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
KLTH0C10604g
Ubiquitin system [BR:
lth04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
KLTH0C10604g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
Pox_A_type_inc
zf-C3HC4_3
Peptidase_M60_C
Motif
Other DBs
NCBI-GeneID:
8291561
NCBI-ProteinID:
XP_002552680
UniProt:
C5DEN1
LinkDB
All DBs
Position
C:complement(878953..880500)
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AA seq
515 aa
AA seq
DB search
MALRVQRRQFVGYTVFTYTAAAWSVLDCLQPSLSFLDACLKLCEGLNLVVLCNFAIVNSI
LLWKGLTRLLFGELRLLEYEHIFERLSFTIVNCFFMSSAFPEYQFLTVMILFALLTFIRV
FHWVLKDRLEYVFQHTDERTNIARLLCSRFFLNVIIFAVVDYQMVRFCLRNSLTNKHDPS
PSAPVYILFCVDFSMLLVDVAEVAMKSVINLIELIQCKRAFERDGDDFVGLDGKFMYEKL
VQLVCQVLKLGLRVASLAPFSMPLMIAKDIIWDGIALFHTGKSVWRTWKSNRQIDEKLPD
VTEAQLNASEDKMCIVCMEDMLPPSEATSAKHKPKKLPCNHCLHLGCLKSWMERSQTCPI
CRVSVFDSKGNVALPNQNAAQQPISEDASVAQQPLSAANESNSTSLASTHTGSLGAVSSS
NPNFPTWYTFPVTLSDNDGAVDFKVRDINGVEINAKLIIKKRPGFDVPKEQDQESQRVVI
NDPPATQYQDIERLKRRISELENKVDELTKKARTE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcgggttcagaggcgtcaatttgtagggtacaccgtgttcacctacacagcc
gcggcctggtctgtactcgactgcttacaaccgagcttatcattcctggatgcgtgcttg
aagctctgcgagggcctcaacctggttgtcttgtgcaacttcgccattgtcaatagtatc
ttgctgtggaagggcctgacgcggttgctgttcggggagctgcgactgctggaatacgag
cacatcttcgaaagactgtcctttacgatagtaaactgtttcttcatgtcttcagccttt
ccagagtaccagttcctgactgttatgatacttttcgctctgctcacatttatccgggtg
tttcactgggtgctcaaagaccgcctagagtacgtgtttcagcacaccgacgagcgcacc
aatatcgctcgcctattgtgttcccggtttttcctcaatgtcattatattcgccgttgtg
gactaccagatggtcagattttgcctgcgcaactcgctaacaaacaagcatgatccgtcc
ccaagcgcgcctgtgtacattttgttctgcgtcgatttctcaatgttactggttgatgtg
gctgaggtggctatgaagagcgtgataaacttgattgagctgattcagtgcaaacgagca
tttgagcgtgatggagatgattttgttggtctcgacggcaagttcatgtatgagaagcta
gttcagcttgtgtgccaagtgcttaaattgggactccgcgtcgcgtcactggcacctttc
agcatgcctcttatgattgccaaagacattatatgggacggaattgccctctttcacacg
ggcaagtctgtttggcgcacttggaaaagcaaccgccagattgacgaaaagctaccagat
gttactgaagcacagctaaatgcctccgaagataagatgtgcattgtttgtatggaagat
atgttgcctccaagcgaggcaacgagcgctaagcacaaacctaagaagttgccttgcaac
cactgccttcatcttggctgcttgaaaagctggatggaaagatcccagacgtgtcctata
tgccgtgtttcagtcttcgatagcaaaggcaacgtcgcgctgcccaatcaaaacgctgca
cagcaaccaatttcagaagatgcaagtgttgcacaacagccgttatcagcggcaaatgag
tctaactcgacgagcctggcatctacccatactggaagtttgggggctgtgtcatcgagc
aatccaaactttccaacctggtacacatttccagtcactctttctgataatgatggcgca
gttgactttaaagtgagagacatcaatggggtcgagatcaacgctaagctgattattaaa
aagcgccctggttttgatgttccgaaagaacaagaccaagagtcacaaagagtggtcata
aatgacccacctgctactcaatatcaagacattgaaagactaaaaaggaggatttccgag
cttgagaataaggtggacgaattaacgaaaaaggcaaggactgaatga
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