KEGG   Lachancea thermotolerans: KLTH0D04048g
Entry
KLTH0D04048g      CDS       T01117                                 
Name
(RefSeq) ESCRT-III subunit protein VPS20
  KO
K12195  charged multivesicular body protein 6
Organism
lth  Lachancea thermotolerans
Pathway
lth03250  Viral life cycle - HIV-1
lth04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    KLTH0D04048g
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    KLTH0D04048g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lth04131]
    KLTH0D04048g
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lth04147]
    KLTH0D04048g
Membrane trafficking [BR:lth04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    KLTH0D04048g
Exosome [BR:lth04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   KLTH0D04048g
  Exosomal proteins of other body fluids (saliva and urine)
   KLTH0D04048g
SSDB
Motif
Pfam: Snf7 TPR_19 YuzC
Other DBs
NCBI-GeneID: 8295124
NCBI-ProteinID: XP_002552899
UniProt: C5DGB9
LinkDB
Position
D:complement(388657..389301)
AA seq 214 aa
MGQKGSKIEVTKTDKAILQIKLSKDELHRYTRRTEILIGREREKLKALLREDPKNGKKNP
RARILLKKIHYQNHLLEQAADQLINLENLVSTVEFKLVEQQFMMGLKQGNEVLTKLNKEF
SGAEDLMDSVADQIAYQDEVDQILSSSVVGGFEEELDRELQQLDQEVNGPAHEPAKAEPN
LPSTEGLPALSEPEAEEPQQEPQSDGRQREAVLT
NT seq 645 nt   +upstreamnt  +downstreamnt
atgggacagaaaggcagtaaaatagaggtcacgaagactgacaaggccatattacaaata
aagctgtccaaggatgagctccaccgatacaccaggcgaacagagattctgataggacgc
gagcgcgagaaactcaaagcactgctgcgagaagatcctaagaatggcaagaaaaacccc
agggcacgtatcctactgaagaaaatccactaccagaaccatttgcttgaacaggcggcg
gaccagctgataaacttggaaaacctagtctctaccgttgagtttaagcttgtggagcag
cagttcatgatgggcctcaagcagggaaacgaggtgctgaccaagctaaataaggagttc
agcggcgcagaagacctcatggactcagtggcagaccagattgcataccaggacgaggtg
gaccagatcctgtcttcaagcgtggttggggggttcgaggaggagctcgacagagaactg
cagcagctagaccaggaggtgaacgggccggcgcacgagccggcaaaggcggagccaaat
ctgccctctaccgaagggctacctgcgctctcggagcctgaggccgaagagccgcaacag
gagcctcagagcgacgggaggcaacgtgaagcggttctcacgtaa

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