Lachancea thermotolerans: KLTH0D04180g
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Entry
KLTH0D04180g CDS
T01117
Name
(RefSeq) cleavage polyadenylation factor subunit PTI1
KO
K14407
cleavage stimulation factor subunit 2
Organism
lth
Lachancea thermotolerans
Pathway
lth03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLTH0D04180g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0D04180g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
KLTH0D04180g
U7-dependent histone pre-mRNA processing factors
KLTH0D04180g
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
CSTF_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
8295130
NCBI-ProteinID:
XP_002552905
UniProt:
C5DGC5
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All DBs
Position
D:395761..396993
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AA seq
410 aa
AA seq
DB search
MSDPRWRKARHLLTPELLSSSIQITNLPASWNESTISSIVAGSGPIVNVSTKTDPRNGKL
LGITVDYATSKDSKRALDVLRKIKKFPCDLERIMPNNKEQKEPRKPLDLNRDAFPWEFGL
ELPFELVSEVPLPRRPTNPVPVSNSGPSGSDASSGVVAFPDILKEASKHLPGLQPNSMTS
PDAISANLGKIAPLQLLEMISNLKILASQDANRDQLTKFLASNPDISVAVTQALLEMGFV
NYSVVTKVIAEQPASRAHASPVPNNVQSIYSNGSTPGTTPMNNSAPLNTFTAPVQQPQPQ
QPAPAPAVAPPMMFNAPPVPAFGFNGVAGPAPFMPAPMGAPMGTPMAPPVVPPMPVANGA
PRVNTMKLATLPQNQQDMIKQVLQLSPDQIRLLPPGQVAMVENFKREYLM
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatccaagatggaggaaagccaggcaccttttaacgcccgagctactgtcttcg
tcaattcagatcaccaacttaccagcttcgtggaacgaaagcacgatttcatcgatagta
gctggctcggggcctatagtaaacgtctcaaccaagaccgatcctcggaatggtaagctg
cttggtataacggtcgattatgcgacaagtaaagacagtaagcgcgctttagatgtgcta
cgaaagattaagaagtttccatgcgacctcgagcgtatcatgccgaacaataaggagcag
aaagagccccgcaagccgctagacctcaacagagatgccttcccatgggagttcggtctc
gaactgccgttcgaactggtttctgaagtgcctctgcctagacgtcccacaaacccggtt
cccgtttccaattcagggccgtctggcagtgacgcaagcagcggtgttgtagcattcccc
gacatcctcaaggaggcctctaagcacttgccgggccttcaacctaactctatgacgagc
ccggacgccatctctgcgaacctgggcaaaatcgcgccgctgcagttgcttgaaatgata
tccaatctgaagattctggcaagccaggacgctaaccgcgaccagctaacaaagtttctg
gcgtcgaaccctgacatatccgtggctgtgacccaagcgctgttggaaatggggttcgtg
aactacagtgtggtgaccaaggtcatcgcggaacaacccgcgagcagagcccacgcatcg
cctgttcccaacaacgtccagtcaatctacagcaatggcagcactcctggcacaacgccg
atgaacaacagcgctccattgaacacattcacagcgcccgtgcagcagccgcagccgcaa
cagccggctccagctccagctgtggcgccccccatgatgttcaacgctcctccagtgcct
gcatttgggtttaacggcgttgctggccccgcgcccttcatgcccgcacccatgggcgca
cccatgggcacgccaatggcgccacctgttgtgccgcccatgccagtcgcaaacggcgcg
ccccgcgtgaacaccatgaagctggcaacgttacctcagaaccagcaggatatgatcaag
caagttttgcagctttcgccagatcaaatacgactgctaccgccaggccaggtggctatg
gtggaaaactttaagcgagagtacctcatgtaa
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