Lachancea thermotolerans: KLTH0D09328g
Help
Entry
KLTH0D09328g CDS
T01117
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase DBP2
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
KLTH0D09328g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lth03041
]
KLTH0D09328g
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0D09328g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KLTH0D09328g
Spliceosome [BR:
lth03041
]
Complex A
U1 snRNP components
U1 related factors
KLTH0D09328g
Complex B
KLTH0D09328g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
Pre-60S particles
Helicases
KLTH0D09328g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
8295354
NCBI-ProteinID:
XP_002553117
UniProt:
C5DGY7
LinkDB
All DBs
Position
D:complement(join(773449..773837,774557..775823))
Genome browser
AA seq
551 aa
AA seq
DB search
MTYGSRDNQFNRDNYGSRGGDFRGGRPSDRNSYGRDSYGGGRGGFSRPPPSQPMELVAPD
WDQELPNLPKFEKNFYVEHESVRNRSDAEVEEFRKANEMSILGKDIPKPITTFDEAGFPE
YVLSEVKAEGFEKPTGIQCQGWPMALSGRDMIGVAATGSGKTLSYCLPGIVHINAQPLLS
PGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGVPRGHQIRELTRGAEIVIA
TPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWP
KEVQQLARDYLHDPIQVNVGSLELAASHNIAQIVEVVSDMEKRDRLLKHLETASEDKDSK
ILIFASTKRTCDEITRYLRQDGWPALAIHGDKAQNERDWVLQEFRTGNSPIMVATDVAAR
GIDVKGINFVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEANKGMGAQLISIMREA
NQQIPPELMKYDRRQYGGHPRYGRGGYGGGRGGRGGYGRGGRGGGRGYGGGRGGGFQKPR
DSGWGNRNINY
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgacttacggatccagagacaaccagtttaacagagacaactatggctctcgtggcgga
gatttccgcggcggaagaccctccgacagaaactcttatggtagagactcgtacggtggc
ggccgcggcggcttctctcgtcctcctccttctcagcccatggagttggttgcgccagac
tgggaccaagagctgcccaacctaccaaagttcgagaagaacttttacgttgagcacgag
tctgtccgcaaccgttccgacgctgaggttgaggagttcagaaaggccaacgaaatgtcc
attttgggtaaggatattccaaagcccatcaccaccttcgacgaggccggattcccagaa
tacgttttgtcagaggttaaggctgaagggttcgagaagcctaccggtattcagtgccag
ggttggccaatggccctttctggtagagacatgatcggtgtcgctgccacaggttctggt
aagactctgtcctactgtctacccggtattgttcacatcaacgctcagcctttgctatct
cctggagatggtcctatcgtgctggtgctggcgccaacaagagagttggccgtccaaatc
cagacggagtgctctaaatttggcaaatcatccagaatcagaaatacctgtgtctacggt
ggtgtgccccgtggtcatcaaatcagagagctgactagaggtgctgagatcgtcatcgct
accccaggtagattgatcgacatgttggaaatcggtaaaactaacttgaagagagttacc
taccttgttcttgacgaggcagaccgtatgttggacatgggtttcgagcctcaaatcaga
aagatcgtggaccagatcagacccgacaggcaaactttgatgtggtctgctacatggcct
aaggaggtgcagcagctagcaagagactacctacacgaccctatccaggttaatgtcggt
tctttggagcttgctgcttctcacaacatcgctcaaatcgttgaggttgtgtctgatatg
gagaaacgtgaccgtttgttgaagcatctcgagactgcctctgaagacaaggattccaag
attttgattttcgcttccaccaagaggacttgtgacgagatcactcgctacttgagacaa
gacggatggccagctttggctatccacggtgacaaagcccaaaacgaacgtgactgggtt
ttgcaagagtttagaactggtaactcccctatcatggtggcaacagatgttgctgctaga
ggtattgatgtcaagggtatcaactttgttatcaactatgacatgccaggcaatatcgag
gattacgtccacagaatcggtagaaccggtagagccggtgcgactggtactgctatttcg
tttttcactgaggctaacaagggtatgggtgctcaattgatcagcatcatgagagaggcc
aaccagcagattcctccagaattgatgaagtacgacagaaggcagtacggtggccaccca
agatacggacgtggcggctacggtggtggccgtggtggccgtggtggctacggccgtggt
ggccgcggtggtggccgtggttacggtggcggccgcggtggcggtttccagaagccaaga
gactccggctggggcaacagaaacatcaactactaa
DBGET
integrated database retrieval system
