Lachancea thermotolerans: KLTH0D09790g
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Entry
KLTH0D09790g CDS
T01117
Name
(RefSeq) TFIIH/NER complex subunit TFB2
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
lth
Lachancea thermotolerans
Pathway
lth03022
Basal transcription factors
lth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLTH0D09790g
09124 Replication and repair
03420 Nucleotide excision repair
KLTH0D09790g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0D09790g
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0D09790g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KLTH0D09790g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KLTH0D09790g
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
8295374
NCBI-ProteinID:
XP_002553135
UniProt:
C5DEU2
LinkDB
All DBs
Position
D:complement(808930..810450)
Genome browser
AA seq
506 aa
AA seq
DB search
MSSTLFKATVTEYLQELPAQVHSRLYSSPATCLAIYRLLPKLAKFFIMSLVFNETDASLR
DLDRWVKSGGKYQFNEAIKSMKSLHLLIEGNSGQPFMINLNPIFRSSFRNALTGGEVNNS
FGNVVEDENETVHTSILDQYAANKWETILHFMVGTPLTQTPSRNVLSLLQHSKLMEESSS
GELQITNEGFQFLLQDANAQIWALLLQYLRLAETLQMDPVDVLNFIFMLGALELGKAYSD
TNLSDTQKIMLQDMRDYGLVFQKASNTHKFYPTRLTAMLTSDTSSIRSASGAMNSVLSQG
TSSSKEEAAAVAETDEETAQVGGTTQNIPDGAVILETNFKLYSYSNSPLQIAVLSLFVHL
KSRFSNMVTGQITRESIRRALHNGITADQIIAYMETHAHPQMRRLAEQTLDKKMELDPNC
NEGLQILPPTVVDQIKLWQLELDRIISYDGYLFTDFENFQEYNMLSSYAKDIGVLLWSDD
KKKRFFVSQEGNSQVIDYAKRKLKKK
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagcacgcttttcaaggccactgtgactgaatacctacaagaactaccagcgcag
gttcactcaaggctttacagctctcccgccacatgtttagcaatctataggctgcttcca
aagttggccaaattcttcatcatgtctctggtgttcaacgaaactgatgcatcgcttcga
gacctagacaggtgggttaagagtggcggaaagtatcagttcaacgaagcaatcaagtcg
atgaagtctctacatttgctaatagaagggaactctggccaacccttcatgatcaacctg
aacccaatatttaggagcagcttcagaaacgccttaaccggtggggaagtcaacaattca
tttggaaatgttgtcgaggatgaaaacgagactgttcatactagtatacttgatcagtat
gctgcaaataaatgggaaacaatattgcactttatggtgggtacgccactaacgcagacg
ccttccagaaacgttctttctttgctgcaacacagtaaactcatggaggaaagcagctct
ggagaacttcaaattaccaatgaaggctttcagtttttgctgcaggatgctaacgcccaa
atttgggctttgctacttcaatacctaaggctggcagaaactttacaaatggaccccgta
gatgtgctaaactttatttttatgcttggcgcccttgagttgggaaaggcatatagcgat
acaaacttgagtgatacccaaaaaatcatgctccaagacatgcgcgactacggccttgtt
ttccaaaaagcctctaatacacacaaattttatcccacaagactgacagctatgctgaca
tcagacacgtcaagtattcgtagcgcttcgggtgcaatgaacagcgtcttgagtcagggc
accagcagctctaaggaagaagctgccgctgtcgcagaaactgacgaagaaactgctcaa
gttggaggaactactcagaacatccccgatggggctgtcattttggagacgaacttcaag
ctctattcttattcaaactcgccgcttcaaattgctgttctgagcctctttgtacatttg
aagtccaggttcagcaacatggttacgggccagattacaagagagtctattagacgagca
ctgcacaacggtataacggctgaccagatcatagcttatatggaaactcacgctcatcca
cagatgaggagactggcggagcagacacttgacaaaaaaatggaactcgatccaaattgt
aatgaagggttgcagatcttgcccccgacggtagtggaccaaataaaattatggcagctg
gagcttgatagaattatcagctacgatggttaccttttcactgacttcgagaatttccaa
gagtataatatgctgagcagttatgcaaaagatattggcgtccttctgtggagtgatgat
aaaaagaagagattttttgtatctcaagaaggaaactctcaagtcatagactatgcaaag
cgtaaattaaagaagaaatag
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