Lachancea thermotolerans: KLTH0D09812g
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Entry
KLTH0D09812g CDS
T01117
Name
(RefSeq) DNA-directed RNA polymerase III core subunit RET1
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KLTH0D09812g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0D09812g
Enzymes [BR:
lth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KLTH0D09812g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
KLTH0D09812g
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
RemA-like
Motif
Other DBs
NCBI-GeneID:
8295375
NCBI-ProteinID:
XP_002553136
UniProt:
C5DEU3
LinkDB
All DBs
Position
D:810820..814254
Genome browser
AA seq
1144 aa
AA seq
DB search
MSTAAVATPHDHFEKDSAFEQLLKPVYKGKKLTDEINTAEDKWNLLPAFLKVKGLVKQHL
DSFNYFVDVDLKKIIKANQLILSDVDPEFYLKYVDIRVGHRSTSSSKDYIVPPHECRLRD
MTYSAPVYVDIEYTRGRNIIMHRDVEIGRMPIMLRSNKCILNGASEKDMAKINECPLDPG
GYFIVNGTEKVILVQEQLSKNRIIVEADEKKAIVQASVTSSTHERKSKTYVITKNDKIYL
KHNSIAEEVPIVLVLKACGIVSDLEIMQLVCGNDSSYQDIFAVNFEEVAKMKIYTQQQAL
EYIGSKVKTVRRQKLSTLQEGIEAIATTVIAHLTVEALDFREKALYIAVMTRRVVMAMHN
PKMVDDRDYVGNKRLELAGQLMSLLFEDLFKKFNNDFKANIDKVLKKPNRAMEYDALLSI
NVHSNNISSGLNRAISTGNWSLKRFKMERAGVTHVLSRLSYISALGMMTRISSQFEKSRK
VSGPRALQPSQFGMLCTSDTPEGEACGLVKNLALMTHITTDDEEEPIKKLCFLLGVECIN
VVDSDSLHLNYCVYLNGTIVGVIRFPTKFVSHFRNLRRSGKVSEFISIYTNSHQKAVHIA
TDGGRICRPLIIVNEGKSLVTAQHLRQLLDGHLQFDDFLKLGLVEYLDVNEENDSFIALY
ERDLEPRITHLEIEPFTVLGAVAGLIPYPHHNQSPRNTYQCAMGKQAIGAIAYNQFKRID
TLLYLMIYPQQPMVKTKTIELIDYDKLPAGQNATVAVMSYSGYDIEDALVLNKSSIDRGF
GRCETRRKLTTVLKRYPNHTQDMVGGMRVDESGEPIWQHKPLGPDGLGEVGMKVESGQIY
VNKSVPTNASDSVLTQSQAQYRETPVVYRAPEPSHIDQVMMSVSENDQALIKVLLRQNRR
PELGDKFSSRHGQKGVCGIIVNHEDLPFNDQGVVPDIIMNPHGFPSRMTVGKMIELISGK
AGVLNGSLEYGTCFGGSKLENMSQILVNHGFNYSGKDMLYSGITGECLQAYIFFGPIYYQ
KLKHMVLDKMHARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCVIAYGASQLLLERLMI
SSDAFEVDVCNKCGLMGYSGWCTSCKGAENVIKMTIPYAAKLLFQELLSMNIAPRLKLED
VFEQ
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacggctgctgttgcaacgccgcatgatcattttgagaaagactcagcgtttgag
cagctcttgaagccagtttacaagggcaagaagctgactgatgagatcaacacggcggag
gataaatggaaccttttgccggcatttctgaaagtaaagggactggtaaagcaacatttg
gactctttcaattactttgttgatgtggaccttaaaaagatcatcaaagctaatcagttg
atacttagtgacgttgacccagagttctatttgaagtatgtggacatcagagttggccac
agatcgacttcttcatccaaagactacattgttcccccacacgagtgtagattgagagat
atgacgtactccgctccagtgtatgttgacattgaatacaccagagggagaaatatcatc
atgcatagagatgtggaaatcggaagaatgccaattatgcttagatcaaacaaatgtatt
ctaaatggtgcttctgaaaaggacatggcaaaaattaatgagtgccctcttgatccaggt
ggttactttatcgtcaacggaactgagaaagtcattctggtgcaagaacaattgtctaaa
aatcgtatcattgtcgaggcagatgaaaaaaaggccattgttcaagcctcggtcacatct
tccacacatgaaagaaaatctaaaacttatgtcattactaaaaatgataaaatatacctt
aagcataactccattgctgaagaagttcccattgtccttgtactcaaagcatgcggcatt
gtgtctgaccttgaaataatgcagttggtatgtggtaacgatagcagttatcaggacatt
tttgcagttaacttcgaagaggtcgcaaagatgaaaatatacacacaacagcaggcgtta
gagtacattggttctaaggtaaaaactgttcggcgtcaaaaactctcaactttgcaagag
ggtatcgaagccatagccacgactgttattgcacacctgacggtcgaagcacttgacttc
agggaaaaggcgctatacatagccgtaatgacaagaagggttgtcatggcgatgcacaac
cctaagatggtcgatgacagagattatgttggtaataaaagactagaactggcaggtcag
ttgatgtctctgcttttcgaagacttgttcaagaaatttaacaatgactttaaagccaac
atcgacaaagttctaaaaaagccaaacagagccatggagtatgacgctttgctttcaatc
aatgtgcactccaataatatttcaagtggtttgaatagagcaatttcaacaggaaactgg
tctttgaagagatttaagatggaaagggcaggtgtaacacatgtattgagtagactctca
tacatctcagcattaggtatgatgacaagaatatcatctcagttcgagaaatccagaaag
gtttcaggcccaagagctttacaaccctcccaatttggcatgctgtgtacttctgatact
ccagaaggtgaagcctgcggtttagtgaaaaacttggcacttatgacacatatcacaact
gatgacgaagaagagcccataaaaaagctttgctttttgctaggtgtcgagtgtatcaat
gttgttgatagcgactctcttcacctcaactactgtgtttacctaaatggtaccattgta
ggcgttattaggtttcccacaaaattcgtctctcattttagaaatctaagaaggtcaggc
aaagtttccgagtttatttccatctacaccaactctcatcagaaagcagttcacatagcg
acagatggtggtagaatctgccgacctctgattatcgtcaacgaaggcaaatctctcgtc
actgcccaacacttgagacagctgctcgatggtcacttgcagtttgacgacttcttaaaa
ctaggtttggttgagtacctggatgtcaatgaagaaaatgattctttcattgcgttgtac
gaaagagacctcgaaccaagaattactcatctcgaaatcgaaccattcactgtgcttggt
gcagtggcaggtttgattccctaccctcaccacaatcaatctcctcgtaacacttatcaa
tgtgcaatgggtaaacaagcaattggtgcaattgcatacaaccaattcaagagaatcgac
actttgctgtacctcatgatttatccccagcaacccatggtgaaaacgaaaacaatcgag
ctgattgattatgacaaacttcccgctggacaaaatgccactgttgcagtcatgtcgtat
tcgggttatgatatcgaggatgctctggttctaaacaaatcttcaattgacagagggttt
ggtcgttgtgaaacgaggcgtaagctgacgaccgttctcaaaagatatcctaatcatacg
caagacatggttggtggtatgagagtcgacgaaagcggcgaacccatatggcaacacaag
ccattgggcccagacggcttgggagaagtcggcatgaaagttgaaagtggccaaatttac
gtcaacaagtcggttcccacgaacgcttcggacagcgtcctaactcaatcacaagctcag
tacagagaaaccccagttgtttatagggctccagagccttctcacatcgaccaggtgatg
atgtcagtttctgaaaatgaccaggctctcatcaaagtgcttttgaggcaaaatagaaga
ccagaacttggagataaattttcgtcgaggcacggacagaaaggtgtgtgcggtatcatt
gttaaccacgaagacttgcccttcaacgatcaaggtgttgtgccagacatcatcatgaat
cctcatggtttcccatctcgtatgactgtgggaaaaatgatagaacttatttccggaaaa
gcaggtgtcttgaatggatcattagaatatggtacttgcttcggaggctccaaattggag
aacatgtcgcaaatattagtcaaccatggttttaactattcgggtaaggatatgctgtat
tctggtatcacgggcgaatgcttgcaagcgtacatctttttcgggcctatttactatcaa
aaacttaagcacatggtcctcgacaaaatgcatgctagagctagagggcccagagctgtc
ctcacccgtcagcccactgaaggtagatctcgtgacggtggtttgagattgggagaaatg
gaaagagattgcgttattgcatatggtgcatctcaactacttttggaaagattgatgatt
agttctgatgccttcgaagttgacgtatgtaacaagtgcggtctgatgggctacagtggt
tggtgcacatcgtgtaagggcgccgaaaacgtcataaagatgacaatcccctatgctgct
aagttgctgttccaggaacttctatccatgaacattgctccccggttaaagttggaggat
gttttcgagcaatag
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integrated database retrieval system
