Lachancea thermotolerans: KLTH0D13046g
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Entry
KLTH0D13046g CDS
T01117
Name
(RefSeq) SWI/SNF catalytic subunit SNF2
KO
K11786
ATP-dependent helicase STH1/SNF2 [EC:5.6.2.-]
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0D13046g
03036 Chromosome and associated proteins [BR:
lth03036
]
KLTH0D13046g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SWI/SNF complex
KLTH0D13046g
RSC complex
KLTH0D13046g
Chromosome and associated proteins [BR:
lth03036
]
Eukaryotic type
Chromatin remodeling factors
RSC complex
KLTH0D13046g
SWI/SNF complex
KLTH0D13046g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Bromodomain
SnAC
ResIII
HDA2-3
HSA
Motif
Other DBs
NCBI-GeneID:
8295519
NCBI-ProteinID:
XP_002553277
UniProt:
C5DF84
LinkDB
All DBs
Position
D:complement(join(1059302..1063870,1063940..1063993))
Genome browser
AA seq
1540 aa
AA seq
DB search
MEIPQRQLTKEEINRCYLRWQQLRNEHGENAANVPEYVYFTKVLQVAAKQQQKRQQEQQQ
GQQSHHQLQQRAPQQAPQQQQLPPQPQQPQQSQQTQAFQQIPQAHMQQSKVMPQMQAAHM
PQAQQQWAPQSTNGHATMANSQPPQDHHIRTSMGQSPQQTQPPQPVQMPQQAHVQNMPSQ
TPPTGTGVPSSIFTPEQSELLKAQIASLKFLLGRQPIPPEVQEVIQRSLNNPPDFKQMLL
SLSETVKKRQNPQQEQVLQNPQQEHTQQPPRRVVDQQQPLAHQSPHTSNSGVPTPLASQF
PPSQPETGLASRANSGSGTANPEKGAESVKTEPIAEIGRPAQDTQPLKEVPPVPLEEFKR
LNPDVEKIVNVTTPNMVVDSYSLPNFPDTAVEYKELFPSKDRPRVMLQPGVLPPGIDVHS
ALEIYQTLIALDIDTAVDSCLSDTLNEDADVETKKRATYDYYALQLLPLQKAMRGHVLQF
DWYQKALLTNTHPNFLSKIRRINLQDALLTDELYRRYEIMQYERQRYEESTKLKSITDSS
IEYYNAKLNRRTQRVKFGHRLISLHGNIEKEEQKRMERNAKQRLQALKANDEEAYIKLLD
QTKDTRITHLLKQTNAFLDSLTKAVRSQQQYTKEKIDSHMQKEEESATPQSPSAGDVSDE
EERQNIDYYNVAHRIKEEIKQQPSILVGGTLKEYQLKGLQWMVSLYNNHLNGILADEMGL
GKTIQTISLLTYLYEAKNVRGPSLVIVPLSTLTNWDSEFDKWAPVIRKVAYKGSPNERKS
KQGIIRSGQFDVVLTTFEYIIKERALLSKIKWVHMIIDEGHRMKNAQSKLSLTLNNYYHT
DYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEET
LLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVLKCKMSALQQKLYEQMLKHRRLFIGD
INSNKMVGMRGFNNQIMQLKKICNHPFVFEDVEDQINPTRETNANIWRVAGKFELLERIL
PKFKATGHRILIFFQMTQIMDIMEDFLRLSGMKYLRLDGHTKSDDRTLLLNLFNDPNSEY
FCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITENS
VEEVILDRAHKKLDIDGKVIQAGKFDNKSTSEEQEALLRSLLEAEEEQKKKRALGMEEEE
QMDDNELNETLARSEEELKIFAQIDEERSRTHLENGITTSLMESSELPNFYHQDIEAELD
KKENDELLSGGRGTRERKSAIYEDDIPEEQWLKQFEISDGEDEPVSGPKKREASETRVPE
KRAKLETEEPSELDVKEEANEKLPPPEAGQTSMKSTKGVKGRPRGRSRGSRINGKAKNGR
NFVRDPDSVTESKEVREEVAAKAKQLHDFAVAYRDADDRRLADIFLVKPSRKLYPDYYLL
IKYPVALETVLKHIETLAYGSLKDALDDFHLIFANARVYNTEESLIYHDSIELENAIIEK
YKEMTGEEKVDFTEFDEEHASQPLVPIGNAESKEPSPAPQ
NT seq
4623 nt
NT seq
+upstream
nt +downstream
nt
atggagattccacagcggcagctaacaaaggaagaaataaatagatgctatttgcgttgg
caacaactgcgtaatgaacatggggagaacgcggcaaacgtaccggaatatgtttatttc
acgaaagttcttcaggtagctgcgaagcagcaacagaagcggcagcaagaacaacaacag
ggacaacaatcccatcatcagctccagcaacgtgcaccacaacaggcgccacaacagcaa
caactgcctccacaacctcagcagccgcaacaatcgcagcaaacacaggcgttccagcag
atcccgcaggcacacatgcagcagtccaaagttatgcctcagatgcaagcggcgcacatg
ccgcaggctcagcagcaatgggctccacaatccacgaatggccacgctacaatggccaat
tcgcagcccccgcaagaccaccacatacgcacgtcaatgggccaatcacctcaacagact
caacccccacaaccggtccaaatgcctcagcaggcccatgtccaaaacatgccatcccaa
acccctcctacaggcacaggcgtcccaagctctatcttcactccagagcagtctgagctg
ctgaaggctcagattgcgtccttaaagtttctccttgggagacagcctataccaccagaa
gttcaagaagtgatccaacgatcgctgaataacccccctgatttcaagcaaatgctgctt
tctcttagtgaaactgtcaagaagcggcaaaaccctcaacaagagcaggtattacaaaac
cctcagcaggaacacacacaacagccgccgcgcagagttgtcgatcagcagcagccattg
gcacaccagtccccacatacctctaactccggggtaccgacacctctcgcatctcaattc
ccaccctcgcaacctgaaacaggccttgcttctcgagcaaatagcggatctggtacagct
aaccctgaaaaaggtgcggaaagcgttaaaacagaaccaatagcggaaattggcaggcct
gcgcaagatacacagccgctgaaggaagtccctccagttccgttggaagagttcaagaga
ttgaatcctgatgtcgaaaaaatcgtgaacgtaacgacgccaaatatggtcgttgattca
tattcacttcccaattttccagatactgcggtagaatacaaagaactgttcccctccaaa
gatcgtcctagagtcatgctccagcccggagttcttcctcctggcatcgatgtccactcc
gctttggagatatatcaaacgttgatagcgttggatattgatacagccgttgattcttgc
ttgtcagatacactgaatgaagatgcagatgtagaaacaaaaaaacgcgcgacttatgac
tattacgcgctccaactccttcctctccaaaaggcaatgaggggccacgtactgcaattt
gattggtaccagaaagccctcttaacaaatacacatcctaactttttgtcaaagattaga
cgaataaaccttcaagatgcgttgctgactgacgagctctacaggcgctatgaaatcatg
caatatgagcgtcagagatatgaagagagcacaaagctaaagagcatcaccgacagctct
attgaatactacaatgcgaagctcaaccggcgtactcaaagagttaagtttggacaccgt
ttgatctctttacatggcaatatagaaaaagaggaacagaagcgaatggaaaggaatgca
aagcagcgtttgcaagccctgaaagctaatgacgaggaagcttacatcaagttattggat
caaacaaaggatactagaatcactcatttgctgaagcaaacaaacgcgtttttggattca
ttgacaaaagcagtcagaagccaacagcaatacaccaaggagaaaattgattcccacatg
cagaaggaagaagagagcgctacgcctcagtcgccttcggcaggcgacgtttccgatgaa
gaggaaaggcagaatattgactattataatgtagcgcatcgcatcaaagaagagatcaag
caacaaccatcgattttagtgggtgggacattgaaagaatatcagttgaagggactgcaa
tggatggtgtctttatacaacaaccacttaaacggtatcttggcagacgaaatgggcctc
gggaaaaccattcaaaccatttcccttttaacttatctttacgaggccaaaaacgtgcgc
ggtccatctttagttattgtccccctgtcaacgttaacaaactgggattctgagtttgac
aaatgggcgccagtgattaggaaagttgcttacaaggggtcccctaacgagagaaagtca
aagcaaggaattattcggtctggccagtttgatgtcgtactgacaactttcgagtatatt
ataaaagaaagggctctgctttctaagatcaaatgggtgcatatgattatagatgagggc
caccgtatgaaaaacgcccaatcgaaactgtctttgacactgaataactattaccacacc
gattaccgtttgatattgacaggtacgcctctacaaaataacttacctgaactttgggct
ctactgaacttcgtgctgccaaaaatttttaactctgttaagtcgttcgatgaatggttc
aacacaccattcgctaacacaggaggccaggacaagattgaactaagcgaagaagagacc
ttgttggtcatcaggaggcttcacaaagtcttacggcctttcctattacgtcgccttaaa
aaggatgtcgaaaaagagttgccagataaggttgaaaaggttctcaaatgcaaaatgagc
gcactgcagcaaaaactgtacgagcaaatgttgaaacatcgtcgcctttttattggtgac
ataaactcgaacaagatggttgggatgcgtggtttcaacaatcaaataatgcaactgaaa
aaaatctgtaaccatccgtttgtgtttgaggacgtggaagatcaaataaatccgactaga
gagaccaacgcaaatatatggcgtgtcgcaggcaaatttgaattgcttgaaagaattctt
cctaagttcaaagctactggtcatcgaattctaattttttttcagatgacacaaattatg
gacatcatggaggactttttaagactttctggcatgaaatacttgcgtttagacggacac
acaaagtctgatgaccgtacgttattgctgaatcttttcaatgatcctaattcagaatat
ttctgctttttgttgtcaactagagcaggtggcctcggtcttaatctacagaccgctgac
actgttattatcttcgatactgattggaacccccaccaggatctacaggcgcaagataga
gcacatagaattggccagaaaaacgaagttcgaattttgaggcttatcacagagaactct
gtggaagaggttattcttgaccgcgcgcataaaaagcttgacattgatggcaaagtcatt
caggcgggtaaatttgataacaaatccacctctgaagagcaagaagcgctgctaagatcg
ttgcttgaagccgaggaggagcagaagaagaaaagggcattgggcatggaggaagaggag
caaatggacgacaatgaactcaatgaaaccttggcaagaagcgaggaagagttgaaaatc
tttgctcaaatcgacgaggaacgaagcaggactcacttggaaaatggtataaccactagt
ttgatggaaagttctgaactaccaaacttctaccatcaagacattgaagccgaacttgac
aagaaagagaatgatgaacttctttcaggtggaaggggaactagggaacgcaaaagcgcc
atttacgaagatgatatccctgaggaacaatggctgaagcagttcgaaatcagtgacgga
gaagacgagcctgtttcagggccaaaaaagcgggaagctagcgaaactcgtgttccagaa
aaaagagcaaagttagagacagaggaaccatccgagctggatgttaaagaggaagccaac
gagaaactaccccctcctgaagccggccaaacatctatgaagtcaacaaaaggtgtgaaa
ggcaggccgcgcggccgcagtcggggctcccgtattaacggaaaggctaagaatggaagg
aattttgttcgcgatcctgactctgttaccgaatcgaaggaagtaagggaagaggttgct
gcaaaagctaaacagctccatgattttgctgtcgcatacagggatgctgacgacaggcgt
ctggcggacatttttttggtcaaaccttcgaggaagctttacccagattattacctgttg
atcaagtatcctgtggcgcttgaaacagtgttgaaacacatagagactctagcttatgga
tctctgaaagatgcgcttgatgattttcacttaattttcgccaacgcgagggtttataac
acagaggagtcactgatataccacgattccattgaattggaaaacgcaattattgagaaa
tataaagaaatgactggagaagaaaaagtggactttacagagtttgacgaagaacatgcg
agccaacccttagtaccaatcggtaatgcagagtccaaagaacccagtcctgctccgcag
tag
DBGET
integrated database retrieval system
