Lachancea thermotolerans: KLTH0D13156g
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Entry
KLTH0D13156g CDS
T01117
Name
(RefSeq) KLTH0D13156p
KO
K14792
rRNA biogenesis protein RRP5
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0D13156g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
90S particles
Other 90S particles
KLTH0D13156g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
OB_RRP5_4th
TPR_14
TPR_19
HAT_Syf1_CNRKL1_C
Suf
NRDE-2
ARM_TT21_N
TPR_CcmH_CycH
ARM_TT21
Mad3_BUB1_I
DUF2025
Motif
Other DBs
NCBI-GeneID:
8295524
NCBI-ProteinID:
XP_002553282
UniProt:
C5DF89
LinkDB
All DBs
Position
D:complement(1069076..1074271)
Genome browser
AA seq
1731 aa
AA seq
DB search
MSSSGQKRKRVEESPLTRQDNTKQPSGPSLLQSVEEASFPRGGASALTPLELKQVANEAA
SDVLFGSGPAVASPAANDSQRPKKKKKTSPKAATGTKDAAGGDDESVAVIDHLTFRNLPV
GTLVLGRISKVNKHDLCVALSDNLCGFVTLPNISEPFTKLLEDIDESMESDKEASDDESD
AEYDNDDDDQKSSQAQAAKLKDLPDLNNFFTQGQWLRCSVHSNSALDKNSKKQKRIELSI
EPSATNQLIEEDLARNCTIQCAVKSIEDHGAILDVGMDGITGFISKKECESLPNFAPGTV
FLANVAKKSGRTVTVNFEFKNKKSKVSQISSVDAVIPGQAVDFLCQKKTSNGVIGKVFGL
VDGFLNISQQAIFYTDSKSDQAYPIGSNTRVRIIASLKNKSGDKFVILSDLPSVLSLASE
TSGNSALEAFPVGYTFENCEVKGRDSQYFYLKLNKDFLGRVHLSKTGEQEPSGEVSARVL
GYDSFDGYYQLATDPKVIAVEYLRPIDIPVGTIVPGCEITEVSDKGIKLSIFGGQFKATV
PPLHISDIRLVYPERKFKIGSKVKGILINATERGQLFMSLKKSLVNLDREETELASSFED
IEKIASSDSKLAATVDIFKPNGCIVSFLNGLRGFLPNSNISEAYVKRPQDHLRLGQTVIV
KVLQHNKEQNRVIVTCKVSSEAASLQREAIENMIVGRSIIKVAVVEKTKDSIVVEQVGTG
LRGVVYVGHLSDSRVEQNRAQLKKLKIGSELEGLVIDKDERTRVFNLSCKKSLMKDAEKS
LLPLNYQDVKQRGNHSPFNGYVKSVSEKGVFVAFNGQFVGLVLPSYAVDSRDVSLSSKFY
VNQSVSAFLLRTDDDNERFLLSFKEPKNEKSSKTPESERPAINPVDQSIKEVSEFALGKV
TKAKVKAVKKNQLNVVLSDNLHGRIDISEVFDKFEDIKDPKKPLATFKKGDVLDVKVIGF
HDVKSHKFLPVSHRSSKNVLIELSAKPSSLAGVNHATIKDVKVGDSIVGFVNNVSKDIMW
LTVSPSLKAKIDFFDLADENSQLGHGIEDSFPLGCALRTKVVSIDQDRNTLSVSARTHDI
KGIKDINVGDCLPARLLKITDSYLLLELGENVRGVAFATDALDDYSKPLKDVYANQKNSI
VSAKVISIDKDDGKLNLSLRSENPRDGTAKTHEDLKRGDVVRGLVKKITEKGIFIYLSST
LQAFVPVSKLTDSFIKDWRKFFKPMQSVVGKVVNCDDDSHILVTLKESEVNGELRILKSY
NDIKVGEIFEGAVKNVTDFGLFVKLDNTVNVTGLAHKTEVADSAVGDLASIFGVGDKVKA
IVLKVNPDKKQLSLGLKASYFKESNENQASDDAEGDEGSESSDEEVVNEEGQESDSDGME
VDDHEGEDKGDKSKQQPVLSSDGLSLSAGFDWTTSILDQAQEEESSEEEDFSETKRSKKK
KKSVQGVEDQTIDINTRAPESVGDFERMIMGNPNSSVIWMNYMAFQLQLGEIDKAREVAE
RALKTISFREEAEKLNIWIGLLNLENTFGTESTLNEVFSRACQYMDSYTIHSKLINIFQM
SHNFEKASLLFKTTAKKFGAEKVSIWVLWSDFLIEQGRAEEARQVLASALQSLPRRNHIE
VVRKFAQLEFAKGDSEQGRSLFEGLLADTPKRIDLWNVYLDQEIKSGDKKRVENLFERVV
NRKLTRKQAKFFFGKWLDFEEASDDQKTAEYVKAKASEYVEKLSQKSASVE
NT seq
5196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcctcggggcagaagaggaagagagtagaggaatctcctctcactcgccaagac
aacacaaaacaaccatcaggtccctcgcttctgcagagtgtggaggaggcttcattccct
agaggtggcgccagcgcgctgacgcctttagagctaaaacaggttgccaacgaagcagca
agcgatgtgctttttggatccgggcctgctgttgccagccctgccgctaacgacagccaa
agacctaagaaaaagaagaagacatcgcccaaggctgcgacaggtacgaaggacgctgct
ggtggcgatgacgagtctgttgcagtgattgatcacctcactttcagaaatctaccagtt
gggactttggtgctcggaagaatcagcaaagttaacaaacatgacctttgtgttgccctc
agcgacaacctgtgtgggtttgttactctaccgaacatctctgaacccttcacaaagctg
cttgaagacatagatgaatctatggaaagcgataaagaagctagcgacgacgagtcagac
gcagaatacgataatgacgacgatgatcagaaatcttcgcaagctcaggccgctaagctc
aaggacctgcctgatctaaacaacttcttcactcaaggtcagtggctgagatgcagtgtg
cattcgaattcggccctcgacaaaaacagcaagaaacagaagaggattgaactctctatt
gagcccagtgcaacaaaccaattgattgaggaagatcttgcgaggaattgcactattcag
tgcgccgtcaagagtatagaggaccacggtgccatacttgacgtgggaatggacggtatc
accggatttatctctaaaaaggaatgtgaatcgcttcccaacttcgcacctggtaccgtc
tttttggccaacgtggccaagaaatctggcagaactgtcacggtcaattttgagttcaag
aataaaaagagcaaggtgtcccagatatcctcagtcgatgctgtcattcctggccaagca
gtggacttcttgtgccaaaagaaaacttcaaatggcgtgattggtaaggtctttggtctc
gtagatgggtttctgaacatatctcaacaggcgatcttttacaccgatagcaaaagtgac
caggcatacccaattggttcaaatacgagagtaaggataattgcctctctcaaaaacaaa
tcgggcgacaagttcgtcattttgtccgacttgcctagcgttttatcacttgcgagcgag
acttcaggaaactcggctttagaagctttcccagttggttacaccttcgaaaattgcgaa
gtcaaaggacgtgactctcaatacttctatctaaagctcaacaaagacttcttgggacgt
gtccacttgtcgaaaacaggtgaacaggaaccatctggcgaggttagcgctcgcgttctc
ggttacgatagctttgacgggtattaccagcttgcaacagatccaaaagttatcgcggtt
gaatatttgaggcccatcgatattccagtaggtactattgttcccggatgcgagatcacg
gaagtctctgacaaggggataaaacttagcatttttggtggccagtttaaggcgactgtg
ccaccacttcatatctctgacattaggcttgtgtacccagagagaaagtttaaaattggc
tccaaggtgaagggtattttgataaacgccacagaaagaggccagctgtttatgtctttg
aaaaagtctctagtcaatctcgatagggaggagactgagctagcgtcaagctttgaggac
atcgaaaagattgcctcctctgattccaaattggctgctacagttgacatcttcaaacca
aatggatgcatagtttcattcttaaacggcttgagaggctttttacccaacagcaatata
tcggaggcctacgtcaagaggcctcaagatcatttgagactagggcaaactgtgatcgtg
aaggttttgcagcataacaaagagcagaaccgagtcattgtcacatgcaaagtttcaagc
gaggctgcgtcgttgcagagagaagccatcgaaaacatgattgtcggaagatcaataatc
aaggttgctgtagttgagaagacgaaggattctatcgttgttgagcaagttgggacagga
ttgagaggtgttgtttatgttggccacctgtctgattctagggttgagcaaaacagggca
cagctcaagaaactcaaaattgggtcagagcttgagggtttggtaattgataaagatgag
agaacaagggtttttaacctttcgtgcaaaaagtctttgatgaaggacgctgaaaagtcg
ctattgcccctgaactaccaggatgttaaacagagaggcaatcattccccattcaatggt
tatgttaaatccgtgtctgagaagggtgtttttgttgccttcaacggtcagtttgtgggt
ctagttctgccaagttatgcggttgacagtagagacgttagtctgtcttccaagttttac
gttaaccaatcggtttccgcattccttttaagaaccgacgatgacaacgagcgtttcctg
ctttcgttcaaggagccaaagaacgagaaaagctcaaaaacacctgaaagtgagcgccct
gctatcaaccccgttgatcaatccatcaaggaagtatccgaatttgcgcttggaaaagtt
acaaaggctaaggtcaaagcagttaaaaaaaaccagctaaatgtcgtcctttccgacaac
cttcatggaaggattgatatctctgaggtcttcgacaaatttgaagacatcaaagatccc
aagaaaccacttgccactttcaaaaagggtgacgtcttggatgtcaaggtcattggattt
catgatgtcaagtctcacaagttcttgcccgtatcgcacagatcttctaagaacgttttg
attgagctttctgcgaagccatcctccctagctggtgtcaatcacgccacaatcaaagat
gtcaaagtgggcgactcaatcgtgggatttgtgaacaacgtttcgaaggacatcatgtgg
ctgactgtctcgccttccttgaaggctaagatagatttctttgatttggctgatgagaac
tcacaactcggccatggcatcgaagactctttcccattaggttgcgctctcagaacaaag
gttgtcagcatcgaccaggatcgcaacactctatcagtatcagcaaggacgcatgacatc
aagggcatcaaagacattaacgtcggcgattgtctgccagcgcgcttgctcaaaattaca
gacagctatctcttgttagaacttggcgagaatgtgagaggcgtcgcgttcgccactgat
gccttggatgattattcgaagcctttgaaggacgtctacgcaaaccaaaagaacagcatt
gtgtctgccaaagtgatctctattgacaaagatgatggcaagcttaacctatctcttcgt
tctgaaaacccaagagacggtactgcaaaaacacacgaagatctgaagagaggagatgtc
gtgcgtggacttgttaagaaaataaccgagaagggtattttcatttacttgagcagcacg
cttcaagcgtttgtgcctgtcagtaagttaactgattctttcattaaggactggcggaag
tttttcaaaccaatgcaaagtgttgttggtaaggttgtcaactgtgatgatgactcccat
atattggttactttgaaagagtcggaagttaatggagaattgagaattttgaagagttac
aatgacatcaaggttggcgagatttttgaaggtgccgtcaaaaatgtcacggatttcggc
ttatttgttaagcttgacaacaccgtgaacgtcaccggtcttgcccataaaaccgaagtg
gctgattccgctgtcggcgatttggcttcgatattcggtgtcggtgataaagtcaaggca
attgtcctcaaagttaatcctgacaaaaaacagctttctctcggtctcaaagcttcttac
ttcaaagagagtaatgagaatcaggcgtctgatgatgcggaaggggacgagggctctgaa
tccagcgatgaagaagttgtgaatgaagaaggccaggaaagcgactctgacggcatggag
gtcgatgaccatgaaggcgaagataagggtgacaagtcaaagcagcaaccagttttgtct
agcgatggtttgagtttgagtgcaggatttgattggactacaagcattttggatcaggct
caagaagaggaatcctctgaagaggaagatttcagcgagaccaaaaggtctaagaagaaa
aagaagtcagtgcagggtgtcgaggatcaaaccattgatatcaacaccagagcgcctgaa
tctgttggtgacttcgaacgcatgatcatgggtaatccaaactcttctgttatctggatg
aactacatggcattccaattgcagcttggagaaattgacaaggcacgtgaagttgctgag
cgtgctttgaagaccataagcttcagggaagaggctgagaagctgaacatatggatcggt
ttgctcaatttggaaaacacgtttggtactgagagtactctaaatgaagttttctcaaga
gcatgtcagtacatggactcctacacaattcacagcaagctcatcaacattttccaaatg
agccacaactttgaaaaagcttctttattgttcaaaacgactgcaaagaaatttggtgcg
gagaaggtctctatttgggttctgtggagtgatttcttgattgaacagggacgtgctgaa
gaagcacgccaagttcttgccagtgctttgcagtctttgccgagacgtaaccacattgaa
gttgtgcgcaaatttgcccaacttgaatttgctaaaggcgacagcgagcagggccgttcg
cttttcgaggggttgcttgccgacactccaaaaagaatcgatttgtggaatgtttaccta
gatcaagagatcaaatcaggcgacaagaagagagttgagaatttgttcgagagagttgtg
aacagaaagctaacgagaaagcaagccaaatttttctttggtaagtggcttgattttgag
gaggcctctgatgaccaaaagactgccgagtatgttaaggcaaaggcctcagagtatgtt
gagaagctaagccaaaagtcagcatctgtagaataa
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