Lachancea thermotolerans: KLTH0D14146g
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Entry
KLTH0D14146g CDS
T01117
Name
(RefSeq) Elongator subunit IKI3
KO
K11373
elongator complex protein 1
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lth03016
]
KLTH0D14146g
Transfer RNA biogenesis [BR:
lth03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
KLTH0D14146g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
Beta-prop_WDR19_1st
ANAPC4_WD40
Ribosomal_L21e
Motif
Other DBs
NCBI-GeneID:
8295568
NCBI-ProteinID:
XP_002553324
UniProt:
C5DFD1
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All DBs
Position
D:complement(1159134..1163105)
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AA seq
1323 aa
AA seq
DB search
MRNLITLNRGRFKPQSFEVPDLRLYGSVFDTLSDSITCVLGDYDLGAFEVHQYMKDGSCN
TLASFNLQTLGGELLSFAHFGDLGQLVFVMSQGDIITASYDTVGFDPSFAVVEIVGSIDG
GISAAEWSYDEETLALVTAERNVVLLSRQFDPIAEYKLEEDDLKMSKHVNVGWGKKETQF
RGKGARAMEREALESLKASGLVGDELRDPTMPYLVDKGTVSAMDSRKASISWRGDCEYFV
VSTIEAVHEESDEPFERRVLRVFSRDGQLQNVSEPVDGLEDLVSWKPQGSLIASVQRRDQ
IPGEESVDLVFFERNGLRHGEFDTRLSLNEKIQALCWNCNSEVLAIVLADRIQLWTTKNY
HWYLKQEVYANDIKFVKWHPEKDFTLMFGDEDYVNVVDFAYKLALGPTLEPSDSGTVLVV
DGCTVNITPLGLANVPPPAYYRDFDAPGNVLDAATSLSNELYVAITNNELVLATVPSLED
MKKGLQPCVVSRLHKSILATEYDSLRQVAFMNDNVLGVLLDADNLSRIALIDVTDITQPT
VFNIIETFDKVVLLRTSFEYNYMVYETKDSRVVQLDQEGQTVEVAKFPQLVRDLRVKRVE
NSKAVDEDDRLAEDSKIVAFGLAANGKLYANDILLTSTVTSMEVTEKFLMFTTAQHNLQF
VHLNSTEFKALPIVEDSVADERVRAIEMGSTLVTAMPSRSSVVLQAARGNLETIAPRIMV
LAGVRKSILAKKYLEALMSCRTHRVHLDILHDYAPDLFYENLEHFINDIGKGEHLDLFIS
CLTEEDVTITKYKETLRASMDERFELAPSAPTEMELYMKKKMFNPELSKVNKICNALLEV
FLNNPDYKKKYIQSILTAYACQNPPNLEAAMMLISSLEEESDTCLTYLCFLHDVNQLYKV
ALSLYDIKLTLNIAQKSQMDPREYLPFLQELHEKEPLVRQFMIDDYLKRYEKALDHLSAL
EKDSKRLSQKFIDYVQTHDLYIYALSMFRYEPDKQNDIYHIYAPFLSSKQEYGEAAVIYE
MLGENREAVEAYTLGKKWCEALALAALKFSDDVPSVADQLVSSLSFDHRFEEAAQIEFVY
LKNTREAVKLYCKAYSYEKATLVAVNDKHPELIEEVLDPGLGEGFGTIAELLADCQSQVN
SQLRRLRELRQKKGDDPYAFYGQETEQADDVSIAASETSTKESFFTRYTGKTGGTAKTGA
SRRTAKNKRREERKRARGKKGTIYEEEYLIQSIGRLIDRLTQTEPDALKLIEALLRRRRR
EEAYQIQKRFVEVTSLLKDNVAEIYTLSEKDRERVDEDGNIYYVPEIPVPTIKDFPALKT
VGY
NT seq
3972 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacctcatcactctgaatcgtggaaggttcaagccacagtcctttgaggtcccc
gacttgagattatatggaagcgtctttgatacgctatccgacagcataacttgcgttctc
ggtgattacgatctaggagctttcgaggtacaccaatatatgaaagacggaagttgcaat
acactggcgtctttcaatttgcaaacactgggtggcgaactcttgtcatttgcacacttc
ggagaccttggacagctggtgtttgtgatgtcgcaaggcgatattataaccgcgtcttat
gacacagtgggatttgatccttcgtttgctgtagtagaaattgtgggctctatagatggc
ggaatcagtgctgcagagtggtcgtacgacgaagagacactggctttagtcactgccgaa
cgtaatgtggtgttattgagcaggcaattcgaccctatcgctgaatacaagttggaagaa
gatgatttgaagatgtctaagcatgtgaatgttggctggggtaagaaagagacacagttt
aggggcaaaggcgcacgtgccatggaaagagaagctcttgaaagcttaaaagcttcaggc
cttgtcggcgatgaattgagggaccctactatgccctaccttgttgacaaagggacagtc
agtgccatggattcaagaaaagcgtctatctcctggcgtggcgattgtgaatactttgtg
gtatcaacaatagaagcagtgcacgaagagagcgacgaacccttcgagagaagagtgtta
agagtcttctcacgcgacgggcagctccagaatgtctctgagcctgtcgacggcctggag
gatcttgtgagctggaaaccacaaggctctctgattgcttcagtgcagagaagggaccaa
attcctggtgaggagtcggttgatttggttttttttgaaagaaacggtttaaggcatggg
gaatttgacactaggctatcactaaacgaaaaaatccaggcattgtgttggaactgcaat
tcagaagttcttgctatcgttctcgctgatcgaattcaactctggacgactaagaattac
cattggtacttgaaacaagaggtttatgccaacgatataaagtttgtgaagtggcatccc
gaaaaagatttcaccttgatgtttggggacgaagattatgttaatgtcgttgactttgct
tataaactcgcactgggcccaacattagaaccctcagactctggaacggttttagtggtt
gatggatgtaccgtcaatatcacgccgttagggttagcaaacgtacctccacctgcatac
tacagagacttcgacgccccaggaaatgttctcgatgccgccacaagcctgtccaatgaa
ttatacgttgcgataactaacaacgagcttgttttggcaacagtgccaagtcttgaagat
atgaaaaagggtctccaaccttgcgtggtgtcgagacttcacaagtcaatcttagccaca
gaatacgactcactacgtcaagttgcatttatgaatgataacgttctgggggtgctctta
gatgccgacaacttatctcgtatagcactaattgatgttacagatatcactcaaccaact
gtgttcaatattatcgagacgttcgacaaagttgttttactacgcaccagctttgaatac
aattatatggtctatgagactaaggactcacgcgtagtgcaacttgatcaagagggacaa
acagttgaagttgccaaattcccacagttggttcgtgatttgagggtgaaaagagttgaa
aactccaaggctgtcgacgaagatgaccgtcttgcagaagattcaaaaattgttgcattt
ggcctagctgccaatggaaaactgtatgcgaacgacatactactcacaagcaccgttact
tcaatggaggttactgagaagtttttaatgttcacaacagctcaacacaatcttcaattt
gttcatttgaattcaaccgaatttaaggctttacctatcgtcgaggacagcgttgcagat
gaaagagtaagagcaatcgaaatgggttcgaccctcgttacggcaatgccttctaggtct
tcggtagtgcttcaagcggcccgtggaaacctggaaacaatagctccgaggattatggtt
ctggctggcgtgcgaaaaagtatactggctaaaaagtaccttgaagctctcatgtcttgt
cgtactcatagagtgcacctagatattctacatgactatgcacccgacctcttttatgaa
aatttggagcatttcattaatgatattggaaagggagagcatctcgatttattcatatcg
tgccttaccgaggaagatgtcacaatcacaaagtacaaagaaaccctacgcgcttctatg
gatgagagattcgagttagccccgtcagctccgactgaaatggagttatatatgaagaaa
aaaatgttcaatccagagctttcaaaagttaacaaaatatgcaatgctttgcttgaagtt
ttcctcaataatcccgattacaaaaaaaagtacattcagtcaattctgacagcatacgct
tgccagaatccaccaaacctcgaagcggcaatgatgctaatttcttcgttagaagaagaa
agcgatacatgcctgacatatctgtgctttttgcatgacgttaaccaactctacaaggtt
gctttgtcgttatacgacatcaagctcaccttgaacattgcgcaaaagtctcaaatggat
cctagagaatacctgccatttttgcaagaacttcacgaaaaagaaccgctagtccgacaa
tttatgattgacgactatctcaaacgttatgaaaaggctttagaccatctttctgcctta
gagaaagattcaaaaaggctctctcaaaaattcattgattatgttcaaacccatgatctc
tacatttatgctttgagcatgttcaggtatgagcctgacaagcagaatgacatttatcat
atctacgctccattcctctcgtcgaaacaggagtatggcgaagcggctgttatttatgaa
atgctgggcgaaaacagagaagctgtcgaagcttacacccttggaaaaaagtggtgcgaa
gccttggctcttgcagctctcaaattcagcgacgatgttcctagcgttgcggatcagttg
gtgtcatctttgtcatttgatcacaggtttgaagaggctgcacaaattgaatttgtttac
ttgaaaaacaccagagaagctgtcaaactttactgcaaagcgtactcctacgagaaggcg
accttagttgccgtaaacgacaagcaccctgaacttatcgaggaagtgcttgaccctggg
cttggagaaggatttggtacaattgcagaacttcttgcagattgccaaagccaagtcaac
tcacaactcaggagactgcgtgagctgcgacagaaaaaaggtgatgacccatatgccttt
tacggccaagaaacagagcaggctgacgatgtgtcaatagcagcatccgaaacctcaacc
aaagagtcgtttttcactcgttacaccggcaaaaccggcggtactgccaaaaccggtgcc
tcgaggcgcactgcaaaaaacaaacgccgtgaagagcgtaaacgtgcccggggcaaaaaa
ggtactatctatgaagaggaatacctaattcagtcgatagggaggctgatagacagactc
actcaaaccgaaccagatgcactaaagcttattgaagcgctactgaggcgcagaaggagg
gaagaggcttaccaaattcagaagcggttcgttgaggttacttctttactcaaggacaac
gtcgcagaaatatacaccctgagcgagaaagatagggagagagttgatgaagacggaaac
atctattatgttcctgaaattcctgtacccactataaaggatttcccagcccttaagact
gttgggtattag
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