Lachancea thermotolerans: KLTH0E01210g
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Entry
KLTH0E01210g CDS
T01117
Name
(RefSeq) TFIIH/NER complex ATPase/helicase subunit SSL2
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03022
Basal transcription factors
lth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
KLTH0E01210g
09124 Replication and repair
03420 Nucleotide excision repair
KLTH0E01210g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0E01210g
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0E01210g
Enzymes [BR:
lth01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KLTH0E01210g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
KLTH0E01210g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
KLTH0E01210g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
DEAD
SBP_bac_6
AAA_34
AAA_22
Motif
Other DBs
NCBI-GeneID:
8291679
NCBI-ProteinID:
XP_002553541
UniProt:
C5DH43
LinkDB
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Position
E:complement(118884..121403)
Genome browser
AA seq
839 aa
AA seq
DB search
MAEHQYQTRSKGGLYSNTDLNYFSDDSVATDNSDYDDGFIDGDDDMGMTNASSRPKPKKQ
VRKTNQKNKKNNSSTNETLNKLAAKDQTFLHDVQTDAPPDFVPDVVSGLFRRNDFSYLKL
KPDHASRPLWISPGDGRVILESFSPLAEQAQDFLVTIAEPVSRPSHIHEYKITAYSLYAA
VSVGLETDDIIAVLDRLSKVPVAPSIINFIKSATVSYGKVKLVIKHNRYFVETSQADILQ
MLLKDPVIGSLRIDSDATPAPNKAGSQQASRPNESAPSEKVDPNDVEAVFSSVVGEIRLD
DDNDDIDAVHAFEIANESVEIVKKRCQEIDYPVLEEYDFRNDHRNPDLDIDLKPSTQIRP
YQEKSLSKMFGNGRARSGIIVLPCGAGKTLVGITAACTIKKSVIVLCTSSVSVMQWRQQF
LQWCTLQPENVAVFTSDNKEMFQTESGLVVSTYSMVANTRNRSHDSQKVMDFLTGREWGF
IILDEVHVVPAAMFRRVVTTIAAHAKLGLTATLVREDDKISDLNFLIGPKLYEANWMELS
QKGHIANVQCAEVWCPMTAEFYQEYLRENARKRMLLYIMNPTKFQACQFLIQYHEKRGDK
IIVFSDNVYALQEYALKLGKPFIYGSTPQQERMNILQNFQFNDQINTIFLSKVGDTSIDL
PEATCLIQISSHYGSRRQEAQRLGRILRAKRRNDEGFNAFFYSLVSKDTQEMYYSTKRQA
FLVDQGYAFKVITHLHGMESLPNLTYSTARERRELLQEVLLKNEEAAGIEVGDDAENSVG
RGAHANKKAKSKAVRGEGSLSGLAGGEDMAYVEYSSNRNKDLKEHHPMIRKLYYRNAKK
NT seq
2520 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacatcaataccagactagaagcaaaggaggtctgtattctaatacagacttg
aactatttctctgatgattcggtggcgactgataactctgactacgatgacgggtttata
gatggtgacgacgatatgggcatgactaatgcctcttcaagacccaagcccaaaaaacag
gttcgcaagaccaatcaaaagaataaaaaaaacaactcttcaaccaatgagaccctaaac
aaactggcagccaaggatcaaacatttctgcatgatgtgcagacggacgcaccgcctgac
tttgttcccgatgtcgtttcaggtctatttcgtagaaacgatttcagctatttgaaactg
aaacccgaccacgcatcgcggcctctctggatttctcctggagacggcagggttatctta
gagagtttctcgcccctagcagagcaggcgcaagactttttggttacaattgcagagcca
gttagccggccttcgcacatccatgaatataaaattacagcctactctctgtacgcggct
gtgtctgtgggtctggagacggacgacattatagcagttcttgataggttgtctaaggtt
cctgtggcgccttcgattatcaacttcatcaaaagtgcaacagtgtcttatggtaaagtg
aagcttgtcattaaacataacaggtattttgtcgagacctctcaggcagacattcttcaa
atgttactaaaagacccagtgatagggtcactcagaatagactcggatgccactccggcc
cccaacaaggccggttcccagcaagcctcgaggcctaatgaaagcgcccctagtgaaaag
gttgaccctaatgatgtggaggcagttttctcttctgttgttggcgagatccggttagat
gatgacaatgatgatattgacgccgttcatgccttcgaaattgccaatgaatctgttgaa
attgtcaagaaaaggtgtcaagaaattgattacccagttctagaagagtacgacttccgc
aatgatcatagaaacccggatttggacattgacctcaaaccttctactcaaattagacct
tatcaggagaagtctttgagtaaaatgtttggtaatggtcgtgctagaagtggtatcatt
gttttgccttgtggtgctggtaaaaccttggtgggaatcacagcagcttgcactatcaaa
aaatctgtgattgtgctttgcacttcgtctgtctctgtcatgcaatggagacaacaattt
cttcaatggtgcaccttacaacccgagaatgttgcggttttcacatcagataacaaggag
atgtttcaaacggaatcaggcctcgttgtttcaacctattctatggtggcaaataccaga
aatagatcacacgattctcagaaagtcatggattttcttaccgggagagaatgggggttc
atcattttagatgaagttcatgttgttcccgccgccatgtttagaagagttgttactacc
atagcagcacacgctaagctaggtcttacagctacattggtgcgtgaggatgacaaaatt
agtgatttaaatttccttattggtcccaaattgtatgaagcaaattggatggagctttcg
cagaaaggacatattgctaatgtgcaatgtgccgaagtgtggtgcccaatgactgctgag
ttctatcaagaatatttgagagaaaatgcaaggaagagaatgttactatacatcatgaat
cccacaaagtttcaggcttgtcaatttttgatacagtaccacgagaaacgaggagacaaa
attatcgtcttctcagataatgtttacgcactacaggaatacgccttaaaattagggaaa
ccattcatttatggttcaacacctcagcaagaaagaatgaacattctacagaactttcag
ttcaacgaccaaattaacacaatatttttatcgaaagtgggagatacatcaattgatttg
ccggaagcaacttgcttgatccagatatcttcgcattacggttcccgtcgtcaagaggcg
caaagattgggtagaattttgcgggccaagagacgtaatgatgaaggatttaacgcattc
ttctactctcttgtatccaaagacactcaagagatgtactattcaaccaaaaggcaggca
tttttggttgatcaaggttatgctttcaaagtcattacccacttacatggcatggagagt
cttcctaatttaacctactcgacagcacgcgaacgtcgcgagcttcttcaagaagtgctc
ttaaaaaacgaagaagctgctggtattgaggttggtgacgacgcggagaattctgtcggc
cgtggggcgcatgcaaacaagaaagctaagtcaaaggctgtaaggggagagggctccctt
tcaggcctggctggcggtgaggatatggcgtatgtggagtactcgtctaataggaacaag
gacctgaaggaacatcacccaatgattcgaaaactgtattatagaaacgctaagaaatag
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