Lachancea thermotolerans: KLTH0E05764g
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Entry
KLTH0E05764g CDS
T01117
Name
(RefSeq) membrane morphogenesis protein VPS13
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0E05764g
Membrane trafficking [BR:
lth04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
KLTH0E05764g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_VAB
VPS13_M
VPS13_C
DUF3040
Motif
Other DBs
NCBI-GeneID:
8291885
NCBI-ProteinID:
XP_002553732
UniProt:
C5DHN4
LinkDB
All DBs
Position
E:complement(507436..516744)
Genome browser
AA seq
3102 aa
AA seq
DB search
MLESLAAGLLNRFLGSYVENFDPKQLNVGIWSGDVKLKKLKLKKESLDALDLPIDVRFGF
LGDLTLLVPWSSLKNKPVKILIEDVYLLCGPRDQSAKSFAEDEERELRLKLQKLDEYEAL
GKSQPTGKEDSSSSESFTQSLLTKVVDNLQISIKNIHIRYEDMDCVFGEVPYSLGATLSE
LSIVSTDEHWEPSFISITSSIARKLLTLNSLSVYWNTDCESVYHPDHDELFRRLRNSISS
KKNIPDHEFLLRPVTGIGRLVLSKKGSTETNPHVDIALVFDEFGFDINNCQYEDILNTAS
KLHWYQKTLKSRKHRPNFPVSEDPKAWFKYAAKAVLQEVHEKNYKWSWDYIKWRRDRRIE
YIPLWKKKLGTEKKTQSLSDEEQQKLKELHKELSFEDIKLFRALAKKSYLTEKLEVSNSA
AESKGSSAAGSSGWFSSWWNGNSPQNDDDLVMSEEQQQELYDAIEFDENKQVIDSIDIPK
DRITAKVTCVLNRGSLSIVDKNRSIKLGEMVFEGCETEFLQRPDSFFCSFKLHEFKVEDG
SPNTLYKHIVSVKNLQMNEGNVSQHDEPFFKVAVEKNPLDDSADSKIDIKLRSMTIFYHV
HFVNEIIKLFRPPRQHLDTIGAIMSAAEATVEGWTVQTRMGLESILEDHKTVNLSLDLQA
PLLIIPLDPHVWASPCAVIDAGHMSIVSDLVPKETLTKYKNMSSSEYEKLDTRDIKRLMF
DRFKLRLTDTQFLIGPDIRSTISNLNVSERESSFVILDKLEVELDVDVSILPKALNLPKI
KIYGKLPLLKLSLNDYQYKVMMQLIDQCLPDLDYPESDLDSVDPKTSSDSKILNSLESKE
VAILRQTLSRLQKMSEAELKQRLLQLTFDVEVIQLSIFKCNNAETMKSDLLVDLFGDRMH
LTFAKKAQDMDLHLNLQSFKVVDHIDSGASSEFKNMIASSNENTQASHLFELKLNRAQRI
VTYNNTLIEVFDQDVSLDMTELTFVLTPKSILTILNYTLTTFTNPEAPELPGDALKHNSP
DLADAPQKINLRMNMDNIIVILNDDSVKLATFRLSAAQIEQLLLPEKMKINAKLGAMQLT
NDADDGLSIDSPLRELISMSGSELAELTYETFDPSTEKLDYSSLLKYKTGSMNVNFVDHA
VNKIVNYLAKFQKMKVFFDRAREAAYNQAGNIETVNNIKLDILVRAPVITFPKLIDPRRN
LFDHVSFFLGEFFLQNSFHNEGERLVNKIKAGIRSGNLGSTFHMEHELTQNLHIIENLDL
HFDIDHYQGTKQIPVKIDAKGVFEPLAAHLTELQLQYIYLLSQRLPNAFIIDYCEDDFAE
IQDVARNANTFVSPEAKTETKPDPILFTEEEDRTSETEFSVNFTAPQLSLTIYNDTKNSS
DISQSGITKISLNDIGLSLGIDKDSRMRAETHIASFTVDDIRKVKQNKHDKIIPKVSHDS
YQFMASYTKEQHESLTVDNVNVTVDSPRIILALDYLFALKSFIDASVNINPPAKVFDKSP
AHASPPALEQEQQPSSTKFQYSINVVDSSLVLLSDPSEENTEAIVFNVGQLLFADQNIMT
ASANNIGMFLCRMQSFDKNRIRLLDDFSSSILFDQRSSTSEKLITDVHASVEPLVMRLAL
RDIRLAMSIFNKAMTLAREHGLSPQVEPEADESGTKYGSFSKEFKKTLSRYAPSIVSSMS
NISKSDDISEEELETIVKHEKLEANFEGLRLVLIGDIHELPIIDLSIKPFTLNAKDWTND
VEAVASIETYANVFNYSRSSWEPLLETVPLSFHLSKGIETDAALCFDIISRQLAEVSLSS
RTIALLSQIPNSLYYTKDTEARGATKPYKICNDTGMDLKIWIASEKPQSKDQITILKSGE
TIPWEFEDWRKVRENLDTDDSMNTLGASIEGGHYESTLKIDVTSEGEDVYTLQPKVNGVH
TRLACELKLCEDNVKLLIIRSTLTLENATSDLLEFKLSNEDGIFTINPGESRSIPAEKAY
SSRFLLKPSGNYGWSRESISWRDLMSRPRSVVCENKEDPALFYYEVDAKFDKEEPLASIY
PHMKVIISSPLILENLLPYSMKYKLFWRSESANATKGKEETETRLLHKGERVLIHSVTLR
DYLLLAVQPMDDGLQMSEQSLINTRPNSELKAESKLFLKYENGQKLNLNLHYRTVEGSRA
KIISVYSPYVILNGSNRDIQVEGDRNNIAISKVLLKDDSSKYTNPRMFSFERDRSNKNRA
RIKFKDSDWSVRTSFDAIGQSVDLTMDIPNKNQESNIGVVVSEGEGKYALSKIIKIMPRY
ILRNNLDVDLEVSEYGSSNVLTAFSKVSFPLYKMRNIVNKHLSIKFLGSQSEWSSPFMIK
DIGSSYVKVLKNRSGHQLLKLDIVLEDSTIFISIDNADGEWPYSIRNFSDHEFIFYQRDP
HTFDTEEDYDLYDDLGDMKYEALYYRVPPRSAMPYAWDYPAARQKKLVLVCRQRQREIQL
AEIGNLRPMRIPSRNGNEAPAIVDLNVVADGPTQALIITNYRPELSLYKLKTGNTTSSSL
SSDKGDRFEVRDEDKNVFTKVVVSFEGVGISLINTRLQELCYVTLNGLELRYNESDLYQT
ASVKLKWLQIDNQLFGGIFPNILYPTAIQKTAKELNNHPVLSGSVSKVKDDTHGVLYLKH
ATLLLQELTVQLDEDFLMALIDFTKVPGASWVNNVEDNMCTECTMLSYPSELQRNNDIYF
EVFHLQPTMLHLSFVRTERLNVEGEKVDPQNTLMFFTNVLTMAFANINDAPIKLNSLFLD
NAKVPLPMLMSAIQVHYGQQFFYQIHKILGSADFLGNPVGLFNNISSGVWDIFYEPYQGY
MMNDRPQELGISIAKGGLSFVKKSVFGLSDSFARFTGSVAKGLSVATQDAQFQERRRLEQ
RKARNNKSINGFGSGATSFVNGVSSGLRGIAFDPYQGASKEGVPGFLKGLGKGLVGLPTK
TAIGMLDLASNVSEGIRNTTTVMDGSLTTQVRLPRYIGYDKIIKPYNLRESQGQYWLKSA
NGGECITDQYLAHVVLPGKQLAVLVSLQHIIEVRLASLEIMWKVRYTDVRSMTLERAGLV
IVLKGASSELFVPISDPEEKRFLYKNISVAVNEYNKYCQAEL
NT seq
9309 nt
NT seq
+upstream
nt +downstream
nt
atgctggaatcacttgcagctggattgctgaatcggtttcttggttcttatgtcgagaac
tttgatccgaaacagctgaacgttggtatttggagtggcgatgtcaagcttaaaaagttg
aaactgaaaaaggaatcccttgacgcgctagaccttcccatagacgtacgctttgggttc
ctgggcgatctcacactactcgttccatggtccagcctgaaaaataaacctgtcaagatt
cttatcgaagatgtctatttgttgtgcgggccccgcgatcagtcggccaagtcttttgcg
gaagatgaggaacgcgaacttagactcaaactccagaaattagatgaatacgaagccctt
ggaaagtcacaacccaccggaaaagaagattcttcgagttctgagagctttacccaatca
ttgctcaccaaggttgtggataatctccaaatatccattaaaaacatacatatccggtat
gaggacatggattgcgtttttggagaagttccatactctttgggtgcgacattaagtgag
ctctcgattgtctcgactgacgagcactgggagccaagcttcatttcaataacaagctcc
attgcgcgtaagctattgacgttgaactccctctcagtatattggaacacggactgtgaa
agtgtgtatcacccagatcacgatgagcttttcagacgtcttcgcaattccatcagtagc
aagaagaacatacctgaccatgaattcctgctaaggcctgtcactggaattggcagactt
gtcttgagcaaaaaaggatccactgaaactaatccacatgttgacattgcgctagtattt
gatgaatttggatttgatattaataattgccaatacgaggacattttgaatactgcctcg
aaactacattggtatcaaaaaactttgaaatccaggaaacatagacctaatttcccagtg
agcgaagacccaaaagcttggttcaaatacgcggcgaaagctgttttgcaagaagtccat
gagaaaaactacaaatggagttgggactatataaaatggaggagggatagaagaattgaa
tatatccctttatggaagaaaaagctgggcactgaaaagaaaacgcaaagcctttctgat
gaggagcagcagaagcttaaagaactgcacaaagagctctcatttgaagacattaagctc
tttagagcgctagcaaaaaaatcatatctcaccgaaaaactggaagtcagtaactctgca
gcggaatccaaaggctcatctgctgctggctcttctggctggttctcttcttggtggaat
ggcaactcaccgcagaatgacgatgacttggtcatgtcggaagagcaacaacaagaactt
tatgatgccattgaattcgatgagaataagcaagttattgattcaattgacattcccaaa
gacagaattactgcaaaggtgacatgcgtcttaaaccgagggtcgctttccattgttgac
aagaataggtccatcaagttaggggaaatggtgtttgaggggtgcgaaacagaatttttg
cagcgaccagattcttttttttgttctttcaagttacatgagttcaaggttgaagatgga
tcccctaacacattatacaagcatattgtcagcgtgaagaatttgcaaatgaacgaagga
aatgtatctcaacatgatgagccttttttcaaagttgcagtcgagaagaacccattggac
gattcggctgatagcaagatcgatatcaagcttcgcagtatgactattttctatcatgtt
cacttcgtcaatgaaataattaaactcttccgtccaccccgccagcaccttgatactatc
ggtgctattatgagtgcggccgaagctactgttgagggttggactgtccagacgaggatg
ggtctggaatccattttggaggaccacaaaactgttaatctgagtttagatctccaggcg
cctctccttataattcctttagaccctcatgtatgggcctccccatgtgctgtgatagat
gcaggtcatatgtcaatagtgagtgatttagtgcccaaggaaactctcacgaaatataag
aatatgagctcgagcgagtacgaaaagcttgacactagagacatcaagcgacttatgttt
gataggttcaaacttcgcctaacagatacccagttccttattggacccgacattcgatcc
acaatttcaaatctcaacgttagcgagagagagagctcctttgtcattttggataagtta
gaagttgaactggacgttgacgtctctattcttcccaaggcgttgaatttgccaaagatc
aaaatttatggaaaactgccccttttaaagctatccttgaatgactatcaatacaaggtc
atgatgcaactcattgatcagtgcctgcctgacctcgattatcctgagagcgatttagac
tctgttgaccctaaaacatcgagtgacagcaaaattttgaacagtttagaaagcaaagag
gtagcaattttgcggcagaccttgtctcggcttcagaaaatgtcagaagctgaactgaag
cagagactactccaattgaccttcgatgttgaagtgattcaactatcgatattcaaatgc
aacaatgcagagaccatgaaatcagacctgctagtcgacttatttggagatagaatgcat
ttgacatttgcaaaaaaggcccaagatatggacttacatctaaatcttcagtcttttaaa
gttgtcgatcatattgacagtggtgcaagttcagagtttaaaaacatgatagcgtcatcg
aatgaaaacacacaagcgtctcacttatttgaacttaaattgaacagggcacaaagaatc
gttacatataataacacgttgattgaagttttcgatcaggacgtcagccttgatatgact
gagctgacatttgtcctgacgcccaaatcaattttgactatactcaactataccctcact
actttcaccaatccggaggccccagagttacctggtgatgccttgaagcacaactctcca
gatttggcggacgcgccgcagaaaattaacctgcgcatgaatatggataacattatcgtt
attctgaacgatgattctgttaaattagctacattccgactaagcgcagctcagatagaa
cagcttctgcttccagaaaaaatgaaaatcaacgcgaagctaggggctatgcaattgaca
aatgatgctgatgatggtttatcgatagactcgcctttgagggaacttattagtatgagc
ggctctgagcttgctgagttgacgtatgaaacattcgatccttcaaccgaaaaattggac
tacagttcccttttaaaatacaaaacgggttcgatgaacgttaactttgtggaccacgct
gtcaacaagatagtaaattacctcgccaaattccaaaaaatgaaagttttctttgacaga
gcccgcgaggctgcgtacaatcaggcaggtaacattgaaacagtcaataatatcaagctg
gatatcctagtgagagcccctgtcataaccttcccgaagttgattgaccctcggagaaac
ctgtttgatcatgtttctttctttttgggagagttctttctgcaaaactctttccataat
gaaggcgaaagattggtaaataaaataaaagcgggaatacgctcaggtaacctaggctca
acgtttcacatggagcacgaacttactcaaaatttgcacatcattgagaacctggatctt
cactttgatattgaccattatcagggcactaagcaaatacctgtcaaaatcgacgccaaa
ggtgtttttgaacctttagctgctcacttaactgaattacaacttcagtatatttatctg
ctgagccagaggcttccaaatgcgtttatcatagattattgtgaagatgactttgcagaa
attcaagatgttgcaagaaacgccaatacttttgtttcgccggaagcaaaaacagagacg
aagcctgacccaattttatttactgaggaagaagaccggacctcggaaaccgagtttagt
gttaattttacggcaccccagctttctctgaccatttacaatgataccaagaattcatcg
gatataagccagagtggaattacaaaaatcagcctgaatgatattggtctttcgctcggc
attgacaaggactcgcgtatgagggcggaaactcacatagcttcgttcacagtcgatgac
atccggaaggtcaaacagaataagcacgataagatcattcccaaagtgtcgcatgacagc
tatcaatttatggcttcatacaccaaagaacaacatgaatcactaacggttgataatgtt
aatgttacggttgatagtccaagaatcattcttgcactagattatctttttgccttgaaa
tcattcattgatgcatctgtgaatatcaatcctcccgccaaggtgtttgataaatccccc
gcgcatgccagcccgccagccctggagcaagaacaacaaccgtcatctaccaaattccag
tattctattaacgtcgttgacagttctctggtccttctgtcggatccttccgaagaaaat
accgaggcaatagtgtttaacgttgggcaactactttttgcagaccaaaacatcatgact
gctagtgccaataacattggcatgtttctctgtagaatgcaatctttcgacaaaaatcgg
attcgcttacttgatgatttttcatcaagcattctttttgaccaaagaagttcgacgtct
gaaaagcttataactgatgttcatgcttcagttgagcctctcgttatgagacttgctttg
agagatatcaggttagccatgtccattttcaacaaagccatgactctcgcaagggaacat
gggctgagtccacaggttgagccagaagcagacgaatcaggtacgaagtatggttcattt
tccaaagaatttaagaaaaccctttcacggtatgcccccagtattgtttcatctatgagc
aatatttcaaaatcagatgacattagtgaggaagaattggagaccattgttaaacatgaa
aagctggaagctaattttgagggcttaagattggtcctgattggtgatattcatgaactt
ccaataattgatttgagcattaaaccttttacgttaaacgccaaggattggaccaacgat
gttgaggctgtcgcatctattgaaacctacgctaatgtgttcaactactctagatctagt
tgggaacctcttttagaaactgtgcctttatctttccatttatcgaagggcatagaaaca
gatgctgccttgtgttttgatatcatttctcgtcaacttgccgaagtgtctctttcatcg
cgtacgatagcattgctctctcagatcccaaattcactttattatacaaaagatacagaa
gctaggggagcaacgaagccttataagatttgcaatgacacagggatggacttgaaaata
tggattgcgtccgagaaaccccaatcaaaagaccagataacaatacttaaaagcggagaa
acaatcccttgggagtttgaagactggagaaaagttcgtgagaacttggatacagacgac
tcaatgaatacgttaggagctagtattgaaggagggcattatgaatcaactttgaagatt
gacgtgacctccgaaggggaagatgtttacaccctccagccgaaagtgaatggggtccat
acaaggctggcttgtgagttgaagctttgtgaagataacgttaagctcttgattataaga
tctactctgaccttagagaacgctacaagtgatttgcttgagtttaagctatcaaatgaa
gacggaatcttcaccataaatccaggagagtcccgctcaatccctgctgaaaaggcgtat
agctctcgtttccttttgaagccaagtgggaactacggctggtcaagagaaagtatatca
tggagggatctgatgtcccgcccacgctctgttgtctgtgagaataaagaagatcctgca
cttttctactatgaagttgatgctaaattcgacaaagaagagcctctggcaagcatatat
cctcatatgaaagtcatcatctcgtcccctcttattttggagaacttgctgccctattcg
atgaaatacaagctcttttggagatcagagagcgcaaacgccacaaaagggaaagaggaa
acagaaactcgtcttcttcacaaaggtgaaagagtgctaattcacagcgtcacattacgt
gactaccttttactggcggtacagccaatggacgatggtcttcaaatgtcagagcagtct
cttattaacactaggcctaattctgaattgaaggcagaaagcaagctatttttgaaatac
gagaacggccaaaagctgaaccttaacctccattatcgaacagtggaaggctctcgtgct
aaaatcattagtgtttattcgccatacgttattttgaatggaagcaacagagatattcaa
gttgagggtgatagaaacaacattgcgatatccaaagtgctcttaaaagatgattcttca
aaatacacgaaccctcgaatgttttctttcgagcgcgatagatctaacaaaaacagagca
cgcataaagttcaaggactcagattggagtgtgaggacgtcttttgatgcgataggtcag
tcggttgatttaacaatggatatacctaacaagaatcaggaaagcaatatcggagtcgtt
gtgtccgaaggcgaaggaaagtatgctctcagtaaaatcataaagatcatgcccagatat
attttgcgaaacaatctggacgtggatttagaagtcagcgaatatggatccagcaatgta
ctcacggctttttcaaaagtctctttcccgttatacaagatgagaaatattgtaaacaag
catctcagcattaagttccttgggtctcagtctgaatggtcttctccctttatgattaag
gatattggttcaagttacgttaaggtactgaaaaacagatctggacatcagcttttgaag
ttagatattgttctggaagattcaaccatattcataagcattgataatgcggacggagaa
tggccatactcgatcagaaatttttctgatcacgaattcatcttctatcagcgggatcct
catacttttgatacggaggaagattatgatctctacgatgatttgggagacatgaaatat
gaagctctatactacagagttcctccaagaagcgccatgccctatgcatgggactatccg
gctgctagacaaaagaagctggttttagtctgtcgtcaacgtcagcgggagatacagcta
gctgaaataggtaacctcaggccaatgaggattccgtcacgaaatgggaacgaagcacca
gccatcgtcgatctcaatgttgtggctgacggccctacgcaagctttaatcatcactaac
tatcgccccgaattaagtctttacaaactcaaaacgggcaacactactagctcatcctta
tcttcggataagggagatcgttttgaagttagggatgaagacaaaaacgtctttactaaa
gtcgtagtttcgtttgaaggtgttggaatttctttgatcaatactcgtctacaagagctt
tgctatgtgacgctcaacgggctcgaacttcgctacaacgaatcagacctataccaaaca
gctagtgtaaaattgaaatggcttcaaattgataaccagttgtttggaggcattttccct
aacatcctttacccaacagccattcaaaaaactgcgaaggaattgaacaaccacccagtg
ctctcaggatctgtatcgaaagtcaaagatgacacacacggcgtcctgtatctcaaacat
gcaacccttctacttcaagagctcactgtccagcttgatgaggactttttgatggcttta
attgactttacgaaagtgccaggagcctcttgggttaacaatgttgaagacaatatgtgc
actgagtgtacaatgctttcatatccaagtgagcttcaaagaaacaacgacatttacttt
gaagtattccacttgcagccaaccatgttgcatctttcatttgtccgtacagagcgcctg
aatgtcgagggtgaaaaggtggaccctcagaatacattgatgttctttaccaatgttttg
actatggcgtttgccaacattaacgatgcacctatcaaacttaactcgttatttttggat
aatgccaaggtgcctttgccaatgctaatgagtgcgatacaggttcattacgggcagcag
ttcttctatcagatccacaaaatacttggttcggctgactttttggggaatccagtgggg
cttttcaacaatatcagctctggcgtgtgggatatcttttacgaaccataccagggatac
atgatgaatgacaggccacaagaattgggcattagtatagccaaaggtggcctgagcttc
gtcaaaaagtctgtttttgggctttctgacagtttcgcgagattcactggctcggtagcc
aagggtctgtcagttgctacacaggatgcacaattccaagagagacgacgcttggagcag
cgcaaggcgaggaacaataagagtattaacggtttcggctccggcgcaacatcttttgta
aatggtgtcagcagcgggcttagaggtattgctttcgatccgtatcaaggcgcttctaaa
gaaggggtccctggctttttgaagggcctaggaaagggactagtcggcctcccaacaaag
accgcgattggcatgttggaccttgccagcaatgtcagtgagggtatcaggaacacgaca
actgtgatggacggctcgctcactactcaggtgcgtctccctaggtatatcggatacgat
aagatcattaaaccatacaatttgcgtgagtcgcagggccaatactggctcaagagcgcc
aatggtggcgaatgcataacggatcagtacttggcgcacgtagtgttgcctggaaaacag
cttgccgtgctggtatctctgcagcacataattgaggtcaggcttgctagtctcgagatc
atgtggaaagttcgctacacagacgttcgctccatgacgctggagagggccggtcttgtt
atagtactcaagggcgcatccagtgagctgtttgtgcctatctcagaccctgaagagaag
aggttcctctacaagaacatctctgtcgcagttaacgaatacaacaagtactgtcaggcg
gaactatga
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integrated database retrieval system
