Lachancea thermotolerans: KLTH0E08360g
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Entry
KLTH0E08360g CDS
T01117
Name
(RefSeq) CORVET complex membrane-binding subunit VPS8
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lth
Lachancea thermotolerans
Pathway
lth04138
Autophagy - yeast
lth04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09140 Cellular Processes
09141 Transport and catabolism
04138 Autophagy - yeast
KLTH0E08360g
04148 Efferocytosis
KLTH0E08360g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0E08360g
Membrane trafficking [BR:
lth04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
KLTH0E08360g
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps8
zf_RING_Vps8_fungal
Beta-prop_HPS5
Beta-prop_VPS8
WD40_WDHD1_1st
VPS8_N
zf-RING_Vps41
zf_RING_Vps8
Beta-prop_EML_2
zf-RING_5
Beta-prop_IFT140_1st
zf-C3HC4
zf-rbx1
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
8292001
NCBI-ProteinID:
XP_002553840
UniProt:
C5DHZ2
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All DBs
Position
E:complement(762740..766468)
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AA seq
1242 aa
AA seq
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MDVKPRKDCSFLETRAQGLVNRDGLSYEPNENDLLNAFNLFEDFNKYNITPVLWSPLEKI
YPLLTPFGCPTVVYPALSYVAIGTSRGNVAIFSHKQFLQVVLAPGDDCPVSKITRICASV
DGTHIAAGLQSGDVVIWNLNGKSRSDGTNRSPRELHPILHIPDHRPHEVTGLGFMSERHT
AIIVSDNSGSISCHSAFRNHIWQLAYNTTDILTLRLKPNEAFATATYPGSFELAFSDIQP
MALLSHTHISLISQTNSEVCFHEETPIGSYRHAQTTWSACGTKLCYIKGKTLGLMRFKRC
LPSSKLETDLHAEWHGQEMLKNVEWLTEDSIAVLTESKKFIMFSSRQDLSVFETVDFQPI
NVLNPSETGFACFEKQVFVLSSYCPQIGSFLSWSDIVLRFVQKQAFLSALKSVAYFLVTE
NLPTDVLGLQKSLALRRKQLAQPLRNLSIASVRHFLVHNDQDVKPGAFIDLIMTILATFA
LVFEDEKESSVFIEQVLELVAKPFQPRFLEVILKLVLREEIRILTPSVSRELLKYSSKQK
SANTVADLVLKLDTSSLDINLAVKVCQKLGLASEIIYLWISSSRDCISPLVDLLLKLSNQ
TDKCQLIPSDTVVPDQLLFNYVSFIMTGREFPIGVQIFPPSLAFDLKLQMCFLLFNGAIV
DWPPNSGTKLYTMEKHVNEPVFPYMDLLLKKNCCRCLAMLHEILEDSFFDDDSIPHIFPQ
NENEFRLRVSRQFVIDLLLDKIKESSLLDERVSIAIFITRNLPKYPQFIRLSNHVLLDLV
LILCSEYSSSLFEDAQRSLESLFAIYDSIEVRKFIPSLKKKRFHRPLFLIYKHQGAFAHM
LELCANSDQADVCANSLLDILKFGLENSLHDKAKKQSLYGAIKANFKTIIEQDVSTVIEV
FDEYDTDLHNNILDVHDQQIQYSYLRKYFQFASALQSLNFELFCQYVVLLCDLNYSDELC
RVLTEASLSSVQCQKAYEILQEHANMQGSVVIQRRMNDFEGVIESIVRFLGRKSINKACG
RIDDQFSAYGDFAIETCLMAGREESKVCWTKFLIFLLTHYGSLNRGQSEAYALMIQRVLE
SLSKLTAFDTDRDTKRLIGSVLTETLESQEVILSKVQELAPLFESVLNSFEVEEHILHKI
LQILNRSSSSVINQYDEILQNGWSIKYNDCEICGKKIWGVGISSTVFTEWEVGAVHADKS
MSNPEKQGSQAFVVFSCHHGFHTRCLENLGQHFGAYKCLLCP
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atggatgttaagccgagaaaagactgtagttttttagaaactagagcacagggcttagtc
aatcgggatggcctgagttatgagccaaacgaaaatgatttgttgaacgcgttcaacctt
tttgaagattttaacaagtacaacattactcctgttctttggtcgccactagagaaaata
tatcctcttttgaccccttttggatgcccaacagtcgtgtatcccgcactgtcatatgtc
gcaattggcacctctcgggggaatgtggctattttcagtcacaaacagttcttgcaggta
gtgctggctccaggtgatgattgccctgtatccaagatcactcggatttgtgcgtctgtt
gatggcacacatatcgcagcaggcttgcaatcgggcgatgtagtgatttggaatttgaac
ggcaaaagccggagcgatggcacaaacaggagccctcgcgaactccatccaatcctgcac
attcctgaccacagaccacacgaagttactggccttggtttcatgtctgaacgacatact
gcaattattgtcagcgataacagcgggtctatatcgtgccatagcgcgttcaggaaccat
atatggcaacttgcatataacacaaccgatatactaacgctgcgattgaaaccaaatgaa
gcatttgcaactgctacgtatccgggctcttttgaactcgccttctcggatattcagcca
atggcgttactttcacacactcatatctcactcatatctcagacgaactcagaagtttgc
tttcatgaagaaaccccaataggctcctatcgtcatgctcagactacctggagcgcatgt
ggcacaaagctttgctatataaagggcaaaactttgggattgatgcgtttcaagcgctgc
ctccccagttccaagctagaaactgatttacatgcagaatggcatggtcaggaaatgttg
aaaaatgtggaatggctcacggaagattcaattgcggtccttactgagtcaaagaagttt
ataatgttcagttcacgacaagatttatctgtttttgagaccgtcgatttccagcctatc
aatgtgctcaatccttccgaaacaggctttgcatgctttgagaagcaagttttcgtgtta
tcgagctactgtccacagattggctcattcctatcgtggtccgacatcgtgcttagattt
gttcagaagcaagcgttcttgagcgcactcaaaagtgttgcttacttccttgtcactgaa
aatttaccaactgatgttttaggattacagaagagcttagcgctacggcgaaaacaattg
gctcaacctcttcggaacctatccatcgcaagcgttcgccattttctagttcacaatgat
caagacgttaaacccggtgcgtttatagacctcattatgacaatcttggcaacattcgcg
ttagtgtttgaggatgaaaaagagtctagtgttttcatcgagcaagttttggaacttgtt
gctaaaccttttcagccaagattcttggaagtgatcctaaagcttgtgctccgagaggaa
atccgcattttaacgccctctgtgtcaagagagctgctaaaatattcttcaaaacaaaag
tctgcaaataccgttgcagatctggtccttaaactagatacaagctcacttgacattaat
ttggcagtcaaagtttgccagaagctcggacttgccagcgagataatatatctgtggatc
tcttcatcacgcgactgcatctcgccgttggttgatcttctgctcaagctatcgaatcaa
acggacaaatgtcaattgataccaagcgatacagttgtccctgaccagcttctcttcaac
tacgtttccttcattatgactggcagagagttccctattggtgtacaaatctttccgcct
tcactcgctttcgacctgaagcttcaaatgtgcttcttactctttaatggtgctattgtg
gactggccgccaaactcaggaacaaaactttacacaatggagaagcatgtcaacgaacct
gtgttcccttacatggacctgctgcttaagaagaactgctgcagatgccttgctatgctc
catgaaatacttgaggactctttttttgatgatgatagcatcccacacatattcccacaa
aatgaaaacgaatttagacttcgcgttagcagacagtttgtgattgatttgctgcttgac
aaaatcaaggagagttcgctactggatgagagggtttctattgctatttttattacgcga
aacttaccaaagtatccacaatttatcaggttatcaaatcatgttctcttagatcttgtt
ctgattttatgctccgagtattcttcttctctgtttgaagatgctcaaagaagtctcgag
tcattgtttgcgatttatgactcgattgaggttaggaaatttattccatccttgaaaaag
aagagattccaccggcctctctttctcatctacaagcatcaaggcgcgtttgctcatatg
ttggaactttgtgctaactcggaccaagccgacgtatgtgccaactctttgctggacatc
ctgaagttcggcctcgaaaattcccttcatgacaaagctaagaaacagtcactctatggg
gctatcaaggcgaatttcaaaactatcattgagcaggacgtgtcgactgttatcgaggtt
ttcgatgaatatgatactgaccttcataacaacattcttgatgtccatgatcagcaaatc
cagtactcgtacctacgtaagtacttccagttcgcttccgccctccaatcccttaacttt
gaattattttgccagtatgtggtattattatgcgatctcaattacagcgatgagctatgt
cgagtattaacggaagcttctttaagctcggtgcagtgtcaaaaggcgtatgaaatttta
caagagcatgcgaacatgcagggctctgttgtgatccagcgcagaatgaatgacttcgag
ggggtcatcgaaagtatagtgcgtttcttaggtcgcaagagcattaacaaggcctgtggg
agaattgatgatcaattcagtgcttatggggattttgcgattgaaacgtgtctcatggca
ggaagggaagaatcaaaagtctgctggacaaagtttctaatttttcttttaacacattat
ggttctctcaaccgaggtcaaagtgaggcctacgccctcatgatccagcgggttttggaa
agcctgtctaaattgacagcatttgatacagatagagatactaaacgcctcattggcagc
gtcttgacggaaacactagaaagccaagaggttattttatccaaagttcaagagcttgca
ccgttgtttgagagtgtgctgaattcctttgaggttgaagagcacatattgcataaaatt
ctccaaatcctgaacaggtcttcctcctcagtcatcaaccagtatgacgaaattttacag
aacggctggtccattaagtacaatgactgcgaaatttgcggcaagaaaatctggggtgtc
gggatctcaagcactgtattcactgaatgggaagtgggggctgtccacgcagacaagtcg
atgtctaatcccgaaaagcaaggaagtcaagcatttgttgtgtttagctgccaccacgga
tttcatacaagatgcttggagaacttaggccaacactttggtgcctacaaatgcctcctg
tgtccctaa
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