KEGG   Lachancea thermotolerans: KLTH0E10120g
Entry
KLTH0E10120g      CDS       T01117                                 
Name
(RefSeq) KLTH0E10120p
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
lth  Lachancea thermotolerans
Pathway
lth03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    KLTH0E10120g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lth03009]
    KLTH0E10120g
Ribosome biogenesis [BR:lth03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    KLTH0E10120g
SSDB
Motif
Pfam: WD40 WD40_Prp19 Utp13 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_TEP1_C NBCH_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 WD40_like Beta-prop_WDR75_2nd Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_NWD2_C WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR35_TULP_N Beta-prop_RIG_1st WD_LRWD1 PEP5_VPS11_N Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_VPS8 Beta-prop_NOL10_N Ge1_WD40 Beta-prop_Nup120_160 VPS8_N Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 8292080
NCBI-ProteinID: XP_002553916
UniProt: C5DI68
LinkDB
Position
E:916575..919055
AA seq 826 aa
MDLKSSYSNSELRPFYAGSGAVASVSEDGRLLATSVIDEVNIIELAPTKRVLHRIENDDE
QEITALKLTPDGEYLCYVSQAQLLRIYHLRSKRVVRSMKVSSPVYVIDCDPSSTLVALGG
TDGSVSVIDIENGYVTHSLKGHGATISSVKFFGELNSTTWRLGSGDTNGVVKVWDLVRRS
CLHTIQEHAAAVRGLDFRVSDADDDVLELLSGGRDDIVNLYQLGSTKKVKLVKTIPVHQQ
IEACGFIHDGEHQDLFYTAGGDAVYQILSLATASVIKKTNKPIEELFIIGVLPILQGSKM
YLVLSDQTLFLVDLEASFVEPDTAVVIESKIAGNHGTVADMRFVGPDLKFLALATNSPAL
RVIPAPDLNAKSIVSDETTAARDHAQDSRDCFPLEVELYEGHTDLLNALDSSEDGKWLAT
CSKDHTVILWRYSSELEKFKAYAKFTGHAGPVTAVGLPNVMRSAWPEFIITASNDLTIKK
WTVPKPGHETAEPHVVKVSDYTRRAHDKDINALSISPNDSTFATASYDKTCKVWDVDSGE
LQGTLANHKRGLWDVSFCQYDKLLATCSGDKTVKVWSLDTLSVVKTLEGHTNAVQRCSFI
NKNKQLVSTGADGLIKLWDLSTGECVRTLDAHENRIWALSVLHDGDEFVTADADGVFQFW
KDCSEEQEKENLENHKRKVEQDQSLQNYMSQGDWTNAFLLAMTLDHPMRLYRVLESASAQ
EDGSSDFVFNEELDNVISTLNNEQIILLMKRSRDWNTNASKHAVAQKTIRCILLRHNIAA
LSDIPGIMNIIDAIIPYTQRHYSRLDGLVEQSYILDYSLVEMDKFM
NT seq 2481 nt   +upstreamnt  +downstreamnt
atggacttgaaaagcagctattccaactccgaacttagacctttctatgccggaagtggt
gcggttgcatcagtctccgaagatgggagactgctcgcgacatctgtgatcgatgaggtc
aacattatagagctagctccaactaaacgcgtactgcatagaatcgaaaatgacgatgag
caggaaattacagccttgaagcttacgccagatggagaatacctctgttacgtttcacag
gcgcagctcttgcgcatatatcacttaagatctaagcgcgtggtgagatcaatgaaggtc
tcttctccagtttatgtcattgactgcgacccaagctccactctcgtggctcttggtgga
acagatggtagtgttagtgtcattgacatcgaaaacggttatgtcactcattctttgaaa
ggacatggagctactatatctagcgtgaagttctttggagagcttaacagcacaacttgg
agactaggatctggcgacacaaacggtgttgttaaggtttgggatttagtacgcaggagc
tgcttacacacaattcaggagcacgcagcagctgtcagaggacttgatttccgtgtttcg
gatgctgacgacgatgtacttgagctcctatctggtggtagagatgacattgtcaacctt
tatcaacttggctctaccaaaaaagtcaagcttgtcaaaactatcccagtgcatcaacaa
attgaagcatgtggattcattcacgatggcgagcaccaggatctcttctacacagcagga
ggggatgcggtgtatcaaattttgtcgctagctactgcatcagtcattaaaaagacaaac
aagccaattgaggaactatttataataggtgtgctccccattttacaaggctcaaagatg
tatctagttctttccgatcaaacattattcttggttgatttggaagcatcttttgttgag
ccggacactgctgttgtcattgaaagcaaaatagctggtaatcacggcacagtagctgat
atgagattcgttgggccggacctgaaatttttggctttggccaccaattcgcctgctctt
agagttattccggcccctgacctgaacgcaaaaagcattgtcagcgatgagacaaccgca
gcacgagaccatgcacaagattctagagattgtttcccgcttgaagttgagctctatgag
ggtcatactgacttgctcaatgcgttagactcaagtgaagatggaaaatggcttgctacg
tgttccaaagaccacacagtaatactttggagatacagctcggaactggaaaagtttaaa
gcgtacgctaagtttacaggacatgcaggcccagttactgcagtggggttgccaaatgtg
atgagaagtgcgtggcctgaatttattataacggcttcaaatgatttgacaatcaaaaaa
tggaccgtgcctaagcctgggcacgagactgccgagccacatgtcgtgaaagtgtcagac
tacacacgcagggcccacgacaaagatatcaatgccctttccatctcgcctaacgactca
accttcgcaacagcttcatatgacaagacctgtaaggtttgggatgttgatagcggagag
cttcaaggaacgctagcaaaccacaagcgtggactgtgggacgtctctttctgtcaatac
gacaaacttctggctacgtgctcgggtgacaaaactgtcaaagtctggtcactggacacc
ttgtcagttgtcaagactctggaaggccacacaaatgctgtacaaaggtgttcattcatc
aacaaaaacaagcagcttgtaagcactggagcagacgggctaattaagttatgggaccta
tctactggagaatgtgtccgcaccttagacgctcatgaaaacagaatttgggcgctgagt
gttttgcatgatggtgacgaatttgttacagcagatgctgacggtgtcttccaattttgg
aaagattgtagcgaagaacaagagaaagagaacttagaaaatcacaaacggaaggttgag
caagatcaatcgctccagaactacatgtcgcaaggcgactggacgaacgctttcttgttg
gcgatgaccctggatcatcccatgcgactatatcgggttttggagagcgcctctgcccag
gaagatggcagttccgacttcgttttcaatgaagagcttgataatgttatcagcaccttg
aacaacgagcagatcattcttctgatgaaaagaagtagggactggaacacgaatgcatca
aagcacgctgtggctcagaagacaattcgttgcattcttttgcgtcacaatatcgcggct
ttgagtgatattcccggaataatgaacattatagacgccataatcccttatactcaaaga
cactactccagacttgacggcctggttgagcaaagttatattttggattactcgctggtg
gaaatggataaattcatgtaa

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