KEGG   Lachancea thermotolerans: KLTH0E14696g
Entry
KLTH0E14696g      CDS       T01117                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
lth  Lachancea thermotolerans
Pathway
lth03030  DNA replication
lth03410  Base excision repair
lth03420  Nucleotide excision repair
lth03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    KLTH0E14696g
   03410 Base excision repair
    KLTH0E14696g
   03420 Nucleotide excision repair
    KLTH0E14696g
   03430 Mismatch repair
    KLTH0E14696g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lth03032]
    KLTH0E14696g
   03036 Chromosome and associated proteins [BR:lth03036]
    KLTH0E14696g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0E14696g
DNA replication proteins [BR:lth03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    KLTH0E14696g
  DNA Replication Termination Factors
   ELG1-RFC complex
    KLTH0E14696g
Chromosome and associated proteins [BR:lth03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    KLTH0E14696g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     KLTH0E14696g
  Check point factors
   HRAD17(Rad24)-RFC complex
    KLTH0E14696g
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_assoc_2 Rad17 DNAX_ATPase_lid AAA_22 Nterm_IS4
Other DBs
NCBI-GeneID: 8292288
NCBI-ProteinID: XP_002554118
UniProt: C5DIS0
LinkDB
Position
E:1307028..1308182
AA seq 384 aa
MTSIFYKDEVLLREFNTNWKAQLTGKMSLWVDKYRPKSLDALTHTPRLTHLLKSLSVEPR
DLPHLLFYGPNGAGKKTRCMALLQSIFGSGVYKLKIDVRQFTTPSNRKLELNVVSSPYHL
EITPSDMGNNDRIVIQELLKEVAQMEQVDFQTASGAETGGLAHRYKCVIINEADSLTRDA
QAALRRTMEKYSRNIRFIMLCESMSSMIAPIKSRCLLVRTPAPTTQETADALVKVGGQEK
VTVEDEAILNTIAESCDGNLRKALLTFESMALNNEMCLKSSTALIRADWVVVILKMANRI
LKDRSVSSLVECRATLYDLLAHCIPAKVIIQELAFALLDAIHNDNHKIAVVQWASVFDER
LRLGNKPIYHLEGFIARVMCEVDG
NT seq 1155 nt   +upstreamnt  +downstreamnt
atgacatcaatattttataaagatgaggtcctgttacgcgagtttaatacaaattggaaa
gctcaattgacaggaaagatgtcgctgtgggttgataagtaccgtcctaagtctttagat
gcattaacacatacaccaaggttaacgcatcttctcaagtcgctatcagtggaaccaaga
gatctgccacatctattgttttacgggcctaatggagcaggtaaaaaaactcgatgcatg
gcattgcttcaatcaatcttcgggagcggagtgtacaagttgaaaatcgacgtaagacag
ttcactaccccatcaaaccgcaagttggagctgaacgtggtatcgagtccgtaccacctc
gaaatcacgcctagcgatatgggcaacaacgaccgcattgtgatccaagaacttttaaag
gaggtggcgcaaatggagcaggttgactttcaaacggcctctggggccgaaactggtggg
ctggctcaccggtataagtgtgtaatcatcaacgaggcagactctctaacgcgggacgca
caagcggcgcttagaagaaccatggagaagtactcacggaacatccgttttattatgctt
tgtgagtcaatgtcttctatgattgcacctataaagtcgagatgcctcctggttcggaca
cctgcgccaaccactcaagaaactgcggacgcactggtgaaggtcggcgggcaagagaag
gtaactgtcgaggatgaggcaattctgaacactatcgccgagagctgtgacggaaacctg
agaaaagcattactaacgtttgagtctatggcactaaacaacgaaatgtgcttgaagtca
tcgactgctctcattagagctgactgggttgtagtcatcttgaaaatggccaaccgtata
ctcaaagatcgctctgtgtcgtccttagtggagtgccgagcgaccctctatgacttgctg
gcccattgtataccagcgaaagtcatcatacaggaactggcattcgcgcttctcgacgcg
attcataatgacaaccacaagatagccgtggtccagtgggctagtgtgtttgacgagaga
ctgcgtctcggtaacaagccaatctatcatttagaaggtttcatagccagagtgatgtgt
gaagtagacggataa

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