Lachancea thermotolerans: KLTH0E15070g
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Entry
KLTH0E15070g CDS
T01117
Name
(RefSeq) KLTH0E15070p
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
lth
Lachancea thermotolerans
Pathway
lth03440
Homologous recombination
lth03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KLTH0E15070g
03460 Fanconi anemia pathway
KLTH0E15070g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0E15070g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
KLTH0E15070g
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
T3RM_EcoP15I_C
NarE
Motif
Other DBs
NCBI-GeneID:
8292305
NCBI-ProteinID:
XP_002554134
UniProt:
C5DIT6
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Position
E:1338973..1340985
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AA seq
670 aa
AA seq
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MRNNDPYLGMSSIEIIEQNDRPGSEIAHQPLNVDIIEITSGNEDLTPAKAATRYTYPSSP
RACHKSSPLRTSVYNSEPLDHSVELSAAFHDDTTIDETISESSFAPLERQQNAAANKSKE
SSPASLISLNKSGPTGIDVPKKLESALDQIISEDIFSSDATENMSRLAPGEQAPLSLKAM
GHKWSLRDGEKLCFSESEQNEAEKVAEVPSARNLFVKSSQSEASIALPHDDRGQSFIEKE
QCSSSTRSRSISTDNKAPASVIYQMNDAIEYSSTPEPAKSHALDQNLVRPPNSTAKVSLK
YSKKRLHDETSEALLSKVGDRNARQIQKFVVLGRSFTDEESKLEINKNLATGAGKKEFNA
ANKLVKEPSVLKEEISIDINESLYQSFLEDGVDLRERLSPAQILHTHTVNPLMKLRRNCK
SIYDYEHGIFYPIKETLVSESISILYYDALEFFHQYTVDKLRLKNFIEGCKEGGQLVLIM
VNGCDSLIKGLQNLENRRFRQQINEELGGTSPKRKRGNNKSFSKLEELNIKPTDVEKEIE
SIAILMKVHFFSVETKQDFAVWMNNLLVVVGRKRYDPIIRHQDWSHISLRSAHDPQDALS
KTVEQLDQMTRLKAQRVVAVYKSFQQLYEDVNKGYLISGNDGNSLMGGAAEKAMATLLTS
ENPEELIYLD
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacaatgatccttacctagggatgtcctccattgaaattatagaacaaaatgac
cggcccggttccgaaattgctcaccagccgttgaacgtggatattatcgaaattacatct
ggaaatgaggatctgactcccgcaaaagcggcaacccggtatacctacccttcttcgccg
cgagcctgtcacaagtcaagccccctaaggacaagcgtttataattccgaaccattggat
cactcagttgagctgtctgccgccttccatgatgacaccacaatagatgaaacaatatca
gagagcagctttgcacctttagaaaggcaacaaaacgcagccgcaaataaatcaaaggaa
tcatctcccgcgtcgctaatttcattaaacaaatcaggccctacgggcatagacgtgcct
aagaaacttgaatccgcccttgaccagattataagcgaggacattttttcttcggatgcg
acagaaaatatgtctagattggcccctggtgagcaagctcctctgagtctcaaagcgatg
ggtcataaatggtccctgcgagatggtgaaaagctttgcttttctgaaagtgaacaaaac
gaagctgaaaaagtcgccgaagttccctcagcaagaaatctttttgtgaagtcttcgcag
tctgaagcgagcatcgctctgcctcatgatgacagagggcagagtttcattgagaaagag
caatgctcttccagcaccagaagccggtcgatttcaacagataataaggctccagcatca
gttatttaccaaatgaacgatgctatcgaatactcttctacaccggagcctgccaaatca
cacgctttagatcagaatcttgtgcgtcccccaaacagcactgcaaaagtcagtttaaaa
tattcaaaaaaaagattgcatgatgagacaagtgaggcgctcctttcaaaggttggggat
agaaacgctaggcaaatccagaaatttgtcgtactcggaaggtcttttacagatgaagag
tcgaaattggagatcaacaaaaatctcgcaacaggcgcagggaaaaaagagttcaatgcc
gcgaataaacttgtaaaggaaccctctgttttaaaagaggaaatatccattgacattaat
gaatcattatatcaatcgttcttggaagatggagtggacttacgagaaagactgtcacct
gcccagattctgcatactcacacagtaaatccgcttatgaagctgcgaagaaactgcaag
tctatctacgattacgaacacggaatcttttacccgataaaggaaactttggtaagtgaa
agtatctccatattatattacgatgcgttagagttttttcatcagtatactgttgataag
ttgcgacttaaaaacttcattgaagggtgtaaagagggtggccaacttgttcttataatg
gtcaatggttgcgacagtttgatcaaggggctccagaatctggaaaaccgacgatttagg
caacaaattaacgaagagttaggaggaacaagcccaaagagaaaacggggaaataacaag
agttttagcaaattggaggaattgaacatcaaacccacggacgtggaaaaagaaatcgaa
agcatcgctatattgatgaaggttcatttcttctcagttgaaactaaacaagattttgcc
gtttggatgaacaatcttttggttgttgtgggaaggaagcgatatgacccgataatccga
caccaggattggtctcatatcagtctcagatctgcacacgaccctcaagacgcattgagc
aaaaccgtcgagcagcttgatcaaatgacaaggctcaaagcccagcgagttgtagctgtt
tacaaaagcttccaacagttgtatgaagatgtcaacaagggttatttaattagtggaaat
gatggtaactcgttaatgggcggtgccgctgagaaagcgatggccacgttactgacgtct
gaaaatccagaagaattaatatatcttgattag
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