Lachancea thermotolerans: KLTH0F03718g
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Entry
KLTH0F03718g CDS
T01117
Name
(RefSeq) exosome non-catalytic core subunit RRP43
KO
K12586
exosome complex component RRP43
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0F03718g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0F03718g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
KLTH0F03718g
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
8292565
NCBI-ProteinID:
XP_002554371
UniProt:
C5DKD3
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Position
F:326533..327672
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AA seq
379 aa
AA seq
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MTESLELRPITFHPDVLARIAPELSMQRHLSLGLRPSLRSFEEFRNVEISDGGLSFASNA
DIDRKGNNILGSNVLKCGKTMVVTSITGGIVEENISGSRVDDESTESSNRADRLSRFAQV
HPVVEVERGRVGAPTDEEMTLSQRLRDCVLHSGLIPKKALDVAVGIRSTDSEGISSILYP
DEEENTISSGLKSRRKWSYVLYAKIQVFSRDGPLFEICWNSLIYALKTTQLPRAFVDERT
ADLKIPVSMRGRSATFRETFDIICDASKFQPLVLNEENVAFASNFAIIDVDPETELPKDE
DEMQVDQGGSVLLADIQGEAEEASVFSTISIISSDAGRLKHFKVIGGGLNASMEHLKKSL
NLAKLRASDLSAKSSSGDR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgacagaatcgcttgagctacgccccataacatttcatcccgatgtcctggctcgaatc
gcgcctgagctgtcgatgcagagacatttatctcttggactaaggccgagcttaagatca
tttgaagaatttcgcaatgttgaaataagcgatggagggctttcgtttgcatccaatgcc
gatatcgaccgtaaggggaacaacatccttggatccaacgtgttaaaatgcggtaaaacg
atggtggttacatcgattactggcggcattgttgaggaaaacatatctggttcccgtgtg
gacgacgaaagcacagaaagctcaaatagagcagacaggctatcacggtttgctcaagtt
caccctgtagtggaagttgaaagaggcagagtcggcgcacccacggatgaggaaatgacg
ttatcacaaaggctgcgcgactgcgtactacattctggtcttattcctaaaaaagcgctt
gatgtcgcagtcggtattaggtcgacagactcagagggcatttcgagtattctttatcct
gatgaagaagagaataccatatccagcggcctcaaatctcggagaaagtggtcctacgtt
ttatacgctaagattcaagttttcagccgagacggacctctctttgaaatttgctggaac
tcactaatttatgctctaaaaaccacacagcttccgcgtgcttttgtcgatgaacgaact
gccgacctcaaaattccagtgagtatgagaggacggagcgcaacattcagggagactttt
gacataatttgcgacgcctccaaatttcagccgcttgttctcaatgaggaaaacgttgct
ttcgcgtcgaacttcgccataatcgatgtagatcctgaaaccgagctgccaaaggacgaa
gacgaaatgcaggttgaccaagggggctctgttcttttagcagacatacaaggggaggct
gaagaggcttctgttttctccacaatctccatcatctctagcgatgctgggagactgaag
cacttcaaagttatcggcggtggtttgaacgcgtctatggagcatcttaagaagtcattg
aatttagcaaaactaagggcctctgacttgagtgccaagtcttcgagcggtgacaggtga
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