Lachancea thermotolerans: KLTH0F05148g
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Entry
KLTH0F05148g CDS
T01117
Name
(RefSeq) retromer subunit VPS35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
lth
Lachancea thermotolerans
Pathway
lth04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
KLTH0F05148g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0F05148g
Membrane trafficking [BR:
lth04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
KLTH0F05148g
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Vps35
Motif
Other DBs
NCBI-GeneID:
8292628
NCBI-ProteinID:
XP_002554430
UniProt:
C5DKJ2
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Position
F:complement(452835..455408)
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AA seq
857 aa
AA seq
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MSYAENIEQAISNCRQQTVLMQRCLSQGKLMDALKHTSIMLTELRSPTLSPKQYYELYIL
IYDSLSILSSYFVECHPKKHHLADLYELVQYAGNILPRLYLMITVGSSYLQSSDAPREEI
LKDMIEMCKGVQNPIRGLFLRYYLSQRTKPFFETEDPEAKRANISLIVANFIEMNKLWVR
LQHQGPLREREQRTRERKELKILVGTNLVRLSQIVESDFAMYRDEILPLVLEQVVQCRDI
VSQEYLLDVICQVFPDEFHLGTLSELLSTTLKLSPAAPVNEVVLTLVERLNGYIDRQEHP
GPDELAKKLESLDISSESQNVFFVFWKFLNQLNEERPDLSLQEFAPIIKGILKLTLRWYP
DNLSNVDVLLKFMYEKCKESGQTVPEDYDYLFQELLLANDLRHDPRFFYQVLTKCESYQK
LFRVQNKGLQKFCVNEILDAITHADLRISSETELQKILGVCEVMIEVGAEKASSSLILDE
DDGTDAEKWSLNADQEKLAKIAHLCYNKSIEKHTELLIACREWFQKGDKNAKYLYPAVIC
NIWKLIRKCQLMIKRKPQRREKMSTTIKQLFKLASRTINELYNTCEGGCLDLLYKLNLQT
ASLADQLELGDIAYDFFSQAFTIFEESLSDSRTQFQAIVNMAQTLQKTRSLYAESSYDTL
ITRCTLHGSKLLKKQDQCRAVYTCSHLWWATEISLLGEEEGVTDNFFREGKRVLECLQRS
LRVADSIMDNVQSCQLMVEILNRCCYYFVHGDENSTHVGTKYINGLIELIKTNLKSLKME
ANQGEDSGERFFIGTDGSYIHQSPVNSVSAVYNKPPTSKGNNLASVPIEFFQRTLQYIED
QKDVDERFKAISVGSTS
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtatgctgagaatatcgagcaagcgatctccaactgcaggcagcagactgtgctt
atgcagcgctgtctgtcgcaggggaagctcatggatgctctgaaacacacgtcaatcatg
ctcacggagcttaggagccccaccttgtctcccaagcagtactacgagctctacattctg
atttacgactctttgagtatactctccagctacttcgtcgaatgccacccgaagaagcac
cacctggcagacctgtacgagttggttcagtacgctggtaacattttgcccaggctgtac
ttgatgatcaccgttggtagcagctacctccagtcttccgacgctccccgggaggaaatc
ctcaaagacatgattgagatgtgcaagggtgtgcagaatcccatcagaggcctgtttctg
aggtactacctctctcaacgaacaaaacctttctttgagactgaagaccccgaggctaag
agagcaaatataagcttgatcgttgccaattttatcgagatgaataaactttgggttcgc
ctgcagcatcagggccccttgcgtgagcgcgaacagcgtactcgcgaacgcaaagagctt
aagattcttgtcggtaccaatttggttaggctctcgcaaattgttgaatctgatttcgcg
atgtacagggatgagatcttgccgctggtgctcgaacaagtggttcagtgtagagatatc
gtctcgcaagagtatctgcttgacgttatttgtcaagttttccctgacgagtttcatttg
ggtactttatcagaacttttaagcactactttaaagctcagcccggctgctccagtgaac
gaagtggtccttacattggttgaaagactcaacggatacatagacagacaggaacatccg
gggcctgatgaacttgctaagaaacttgagtctcttgacatttccagtgaaagccagaat
gtcttttttgttttttggaagtttctcaaccagcttaatgaggaaaggcctgatttgtca
ttacaagagtttgctcctattatcaaaggaattttgaaactaacgttaagatggtatccc
gataatttaagcaacgtggatgtccttttaaaattcatgtatgaaaagtgcaaagaaagc
ggccagactgtacctgaagactacgactatctgtttcaggagctgcttttggctaacgac
ttgaggcatgatccacgctttttctaccaggtcctcacaaagtgcgaatcttaccaaaaa
ttattccgtgtccagaacaagggcctgcaaaagttctgtgtcaacgagattcttgatgcg
attactcacgcggatctgcgcataagctctgaaactgagctccaaaagattctgggcgtt
tgcgaggtcatgatagaggttggcgccgaaaaggcgagctcttccttgatacttgatgag
gatgacggcacggatgctgaaaaatggtccttgaatgccgaccaggagaaactcgccaaa
attgcacatttgtgctacaataaatccattgagaaacataccgaactcttaatagcttgt
cgggaatggttccaaaagggagacaaaaacgcaaagtatctctacccggctgtaatatgc
aatatatggaagctgatccggaaatgccagttgatgatcaaaaggaaaccacaacgccgt
gaaaagatgagcaccaccatcaagcagctcttcaaacttgcttcaagaactatcaacgaa
ctttataacacctgcgagggagggtgccttgatttactctacaagctcaacttgcagaca
gcctcccttgcagaccagctagagcttggtgacattgcctatgactttttctcccaggcc
ttcactatatttgaagagtcactaagcgattcgaggacgcaattccaggctattgtcaac
atggcacagacattgcagaaaacgcggtctctgtatgcagaatccagctatgatacccta
ataacaagatgcactttgcatggatcaaagctgctgaaaaagcaggatcaatgtagagct
gtctatacgtgctctcacttgtggtgggccactgagatatcattgctcggtgaagaggaa
ggtgttactgataatttctttcgcgaaggaaagcgtgtactggaatgcttgcaacgctcg
ctgagggtagcggattctatcatggataacgttcagagctgccagttaatggtggagatt
ttgaatagatgttgctactactttgttcatggtgacgagaactccacgcatgttggcact
aaatacattaacgggctaatcgagctcatcaaaaccaacctaaagtccctcaagatggaa
gcaaaccagggcgaagatagtggagaaaggttttttattggtactgacggctcatacatt
catcaaagccccgtcaacagcgtcagcgcggtgtataacaaaccgcctacgtcgaaaggc
aacaatttggcttctgttccaatcgaattctttcagaggacattgcaatatatagaagat
cagaaggacgtcgacgagaggttcaaggcgatttctgttggctccacgtcctga
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