KEGG   Lachancea thermotolerans: KLTH0F05544g
Entry
KLTH0F05544g      CDS       T01117                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
lth  Lachancea thermotolerans
Pathway
lth03020  RNA polymerase
lth03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KLTH0F05544g
  09124 Replication and repair
   03420 Nucleotide excision repair
    KLTH0F05544g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lth03021]
    KLTH0F05544g
   03400 DNA repair and recombination proteins [BR:lth03400]
    KLTH0F05544g
Transcription machinery [BR:lth03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     KLTH0F05544g
DNA repair and recombination proteins [BR:lth03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      KLTH0F05544g
SSDB
Motif
Pfam: RNA_pol_Rpb4 PTN13_u3 Spo16_C Ribonuc_L-PSP
Other DBs
NCBI-GeneID: 8292644
NCBI-ProteinID: XP_002554446
UniProt: C5DKK8
LinkDB
Position
F:479908..480501
AA seq 197 aa
MNVSTSTFSTKRRGLKKVEEEENAATLQLGEEFQLVQVNHQGQEEELIALNLSEARLVIK
ESLEMRKKLFKHWNKQEDSMEADDDVDENSHAQTQEKELQNIDKLLETTTGGNNQALKQT
MVYLTNFSRFKDQETVTAVTQLLQSTNLHPFEIAQLGSLSCEDADEAKTLIPSLGNKISD
EDLERILKELSNLETLY
NT seq 594 nt   +upstreamnt  +downstreamnt
atgaacgtttcaacttctacgttctcgactaagagaagaggtctcaaaaaggttgaagaa
gaagaaaatgctgctaccttacagctcggcgaagagttccagcttgtacaagttaaccac
caaggccaggaagaggagctgatagcgctgaacctcagtgaggcacggcttgtgatcaaa
gagtcgttggagatgcgcaaaaaactgttcaaacattggaacaagcaggaggacagcatg
gaagctgacgacgatgtggacgagaactcgcacgcgcagactcaggagaaggaacttcag
aacattgacaaactgctagaaactacgacgggtggcaacaaccaggcgctcaagcagact
atggtgtatctgaccaatttctcccgcttcaaggatcaagagaccgtgacagctgtgacc
cagctgctgcagagcaccaacctgcacccgttcgaaattgcccagttgggttccctgtcg
tgcgaggacgcggacgaagccaagactctgattcccagtttaggaaataagatctctgac
gaagaccttgaaagaatcctcaaggagctatctaaccttgaaaccctgtactaa

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