KEGG   Lachancea thermotolerans: KLTH0F06028g
Entry
KLTH0F06028g      CDS       T01117                                 
Name
(RefSeq) KLTH0F06028p
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
lth  Lachancea thermotolerans
Pathway
lth03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KLTH0F06028g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0F06028g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     KLTH0F06028g
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     KLTH0F06028g
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 8292666
NCBI-ProteinID: XP_002554468
UniProt: C5DKN0
LinkDB
Position
F:complement(537096..537578)
AA seq 160 aa
MSEMKSAPSGASKISEGEADLYLDQYNFTTTAAIVGSVDRKIFVLLRDGRMLFGILRTFD
QYANLILQHCVERIYITEENKYAECGRGVFMVRGENVVMLGEVDIDREDQPLSQMERISF
EEASAVKKQRDDARCELESKKGKTMAQHGLIYEFHKSDIY
NT seq 483 nt   +upstreamnt  +downstreamnt
atgtccgaaatgaagagcgcaccctccggtgcttctaagatctccgagggcgaagcggac
ctttacctcgaccagtacaacttcacgacaacagcggcgatcgtaggatctgtggatcgc
aaaatatttgtgcttctgagggacggccgcatgcttttcggcatcctgaggacgttcgac
caatacgcgaacctaatcctgcagcactgcgtcgagagaatatacataacagaggagaac
aagtatgcggagtgtggccgcggtgtgttcatggtgcgtggtgagaacgtagtaatgttg
ggcgaggtagatatagaccgggaggaccagccgctaagccagatggagcgcatctcgttc
gaggaggcgtctgcggtcaagaagcagcgcgacgacgcccgctgcgagttggaaagcaaa
aagggcaagaccatggctcagcatggcttaatttacgagtttcataagtcggacatatac
tag

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