Lachancea thermotolerans: KLTH0F07458g
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Entry
KLTH0F07458g CDS
T01117
Name
(RefSeq) cleavage polyadenylation factor subunit FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
lth
Lachancea thermotolerans
Pathway
lth03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLTH0F07458g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0F07458g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
KLTH0F07458g
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GFIT
Motif
Pfam:
Fip1
TFIIF_alpha
DUF4661
Motif
Other DBs
NCBI-GeneID:
8292731
NCBI-ProteinID:
XP_002554527
UniProt:
C5DKT9
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Position
F:643237..644073
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AA seq
278 aa
AA seq
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MNSSDEDERFLYGSDEEGAEAVSPSENKNKRPLTQPNDEEETKKPKVDSTEDNAASSSSS
DENSSENEESDEDSDVEFIIGVGADSSKLDSKKDSATAASGPKPTTIAPPATNIGSAAVE
TEATAGLSTAAVDADAGTSAAPGTERLPAIDLNAVGKLGDQPITDIDPEVLKEKPWRQPG
ANISDYFNYGFNEQTWMEYLHKQEKLRAEYNPHKMLMGLLALQQQGKLNDSGSDSMGQEN
APAAMAPPAFPMGMPPMFGGFPFPFPGMMNNMNPQQKK
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaactctagtgacgaggacgagcggtttttgtatggctcagatgaagaaggggcggaa
gctgtgtcaccttctgagaacaagaataagagaccgctaacgcaacccaatgacgaagag
gaaaccaagaagcccaaggtagacagcactgaggataatgcggcctcgagcagtagtagc
gatgaaaattctagcgaaaatgaagagtcagacgaggactctgacgtcgaattcatcatc
ggtgtcggggcggatagctcgaagctggattccaagaaagactctgcaaccgccgcatca
ggaccaaaaccaacaacgatcgcaccccctgctacaaatataggctccgctgctgtggag
acggaagccactgcagggctgagtacagctgcagttgatgcggacgcaggaacctcggcc
gctcctgggactgagcgtctaccggccatcgacctcaacgcagttggcaagcttggcgac
cagccaataacagacattgacccagaggttctcaaagaaaaaccgtggaggcagccaggc
gcaaatatcagtgactattttaactacggtttcaacgaacaaacgtggatggagtacctg
cataaacaagaaaagctacgcgcagagtacaatccccacaaaatgcttatggggctactg
gccctgcaacagcaaggaaagctcaacgactcagggtccgacagtatgggacaggaaaat
gcgccagcggctatggctccacctgctttccccatgggcatgccccccatgtttggcgga
tttcctttcccattccctggcatgatgaacaatatgaacccacagcaaaaaaagtag
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