Lachancea thermotolerans: KLTH0F08360g
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Entry
KLTH0F08360g CDS
T01117
Name
(RefSeq) RNA-processing protein REF2
KO
K15543
RNA end formation protein 2
Organism
lth
Lachancea thermotolerans
Pathway
lth03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
KLTH0F08360g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0F08360g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
KLTH0F08360g
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NCBI-GeneID:
8292772
NCBI-ProteinID:
XP_002554566
UniProt:
C5DKX8
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Position
F:complement(722163..723695)
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AA seq
510 aa
AA seq
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MSGSPIPQLVNISHALQSSFIQQLRTETREFSETPTLSQEQQRKIDTYIGSLERAFTAFT
RDNEHIERRDADVTPADVQLYSGLKTMYADYLTQLTKLKRKSVVQNEASLRDQQKSANQS
DNTRTTNPSAKKSENVRSSPQKEAVKTEAKAPSRASTTNEGGLWRASQEKNAGQNEHLRA
NQVLEYMQDELPYQQPAERKSYVDNLQKNADLTLQKNPKLLDAVANLAILDSTVSENLHS
YVTLLRMVGYKDDEFAARLPHINGKLTPSDKALPPTSSADQASAKAPAPEEPKKKISFLK
YLKKGDVNEQGKRVLEDNTLGGSQKRSRPNNDNNSNLISILKSETSKKRRNPIRFVADEK
LLTVYGDDIPSDGLIVSPGKLKKVLKPFKDGEPREVTFPTWKNQKVRELSIPKPTEDSDI
VDIKGGPISCDTRVSANYRLNFTAFSKSLNKQPLEPTELDEKDPNLTKKPLIVRAFGKNC
LLLQKDRGGLPYKRVPEVSLNDYPIRPTSN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcagtcccattccacagctagtaaacatatcgcatgccttgcagtcgtctttt
atccagcaactaaggaccgaaacgcgtgagtttagcgagacgccaacgctttcgcaggag
cagcagcgcaagatagatacatatattggctcccttgagcgcgcattcacagctttcacg
cgtgacaacgaacatatcgaacgtagagatgccgacgtcactcccgcagatgttcagcta
tacagcgggctaaagacaatgtatgctgactaccttacacagctaacgaaactgaaacgg
aagagcgttgttcaaaacgaagcatcgcttcgagaccaacaaaagagcgcaaaccaaagc
gacaatactcgtaccactaatccaagtgcaaagaaaagtgaaaatgtaagatccagtccg
cagaaagaagccgtcaagacagaagcgaaagctcctagtcgagcgagtaccactaacgaa
ggggggctttggcgcgccagtcaagagaagaacgcggggcaaaacgagcatttgcgtgcc
aaccaagtcctcgagtatatgcaagacgagctgccctatcaacagcctgcagaacggaag
agctatgtggacaatttacagaaaaacgcagacttgacactgcaaaagaaccccaagctt
ctcgacgctgttgcaaacttggcaatacttgactctaccgtttccgaaaaccttcattca
tatgtgacactgttaagaatggtaggttacaaggatgatgaattcgcggcacgtctacct
catattaatggtaaacttacaccctcagacaaagcgctgccgcctacttcaagcgccgac
caggcttctgcaaaggcccccgcacccgaagaacctaaaaaaaagatttcatttctgaag
tacttgaaaaagggagatgtgaatgagcaaggaaaacgtgttttggaagacaatacattg
ggtggatcgcaaaagcgaagccgccccaataacgataacaactcaaatcttatttcaatt
ttgaaaagtgagacttctaagaagaggcgcaatccgattcgctttgtggcagatgagaaa
ctcttgacggtctacggtgacgacattccctccgatggtctaatagtgtcgcctggaaag
ctgaaaaaagttttgaagccattcaaagacggcgagccccgtgaagtgacatttcccacc
tggaagaaccagaaagtcagagaactgtcaataccgaagccaactgaagactcggatatt
gtggacatcaaaggagggcccatttcttgtgatactagagtctctgccaactaccggttg
aacttcacagcattcagcaaaagcctgaacaaacagccacttgagccaactgagctcgat
gagaaggacccaaaccttacaaaaaagccgcttatcgtacgtgcttttggcaagaactgc
ctacttcttcagaaagacaggggtggcttaccttacaagagggtgcctgaggttagtctg
aacgattatcctatcagaccaacatctaactga
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