Lachancea thermotolerans: KLTH0F09724g
Help
Entry
KLTH0F09724g CDS
T01117
Name
(RefSeq) mismatch repair ATPase MLH1
KO
K08734
DNA mismatch repair protein MLH1
Organism
lth
Lachancea thermotolerans
Pathway
lth03430
Mismatch repair
lth03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
KLTH0F09724g
03460 Fanconi anemia pathway
KLTH0F09724g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0F09724g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
KLTH0F09724g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mlh1_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
8292834
NCBI-ProteinID:
XP_002554627
UniProt:
C5DL39
LinkDB
All DBs
Position
F:complement(join(842593..844758,844826..844849))
Genome browser
AA seq
729 aa
AA seq
DB search
MSAPLKIKPLAESVVNKIAAGEIIVAPVNALKEMMENSIDAGATAIDILIKEGGLKILQI
TDNGSGIDKSDLPILCQRFTTSKLKTFEDLSSIQTYGFRGEALASISHIARVTVTTKTKN
EACAWRVSYSAGKMIGEPKPIAGRDGTIILVEDLFYNVQSRLRSLRSPGDEFAKILDCVG
RYAINSKNVGFSCKKFGESQFALTVRYDADVRERVQAVFGRGTASNLIELKVPEIEGLGA
SASGQVSTLNFINKKSISPIFFINNRLVTCDPLRRALYQTYSSHLAKGNRPFIYLNVTIR
PELVDVNVHPTKREVRFLHDEEIIEQIASQLGDVLSNCDTSRSFKTTSIFTQKPVSIREN
LGKPHSQLINNIPVTPLGNKVKRQENKLVRIDASQTKITNYLRSAEYTENTEQSTPYKQS
YEDDSIQSSCRASEGRQHQGSWIADTPSRRASKTSTYTVSRKTRVEVNLASVNMLRKEVD
SSMNKDLTNIFANLTYIGLADEQRRLACIQHDLRLFLVDYGSICSELFYQVGLTDFANFG
KIFLINEDESAGSQEEGLSVGSLLQEVVSSRGGSSTELIRPLWDMREMLEEYFSIELYGG
DTHVENTKIKSLPLLIKGYIPPLSKLPHFLYRLLTKIDWSDEMKCLQGILKQIALLYVPE
MIEQIDPEDSSIKEEERIRYLTDTENMEKILEETIFPCIKKRLLAPRDLMGNVVEVANLP
GLYRIFERC
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgcctttgaagataaagccattggctgagtccgtggtgaacaaaattgcagca
ggagaaattatcgttgcacctgtcaatgctttgaaagaaatgatggagaactccatcgat
gctggagccactgcgattgatattcttatcaaagagggaggattaaaaattctacaaatc
acggataatggaagtggcattgacaagagcgacttgcctattctttgtcaaagattcacc
acatcgaaactgaagacctttgaagatctgagttcgatacaaacctatggctttcgtggg
gaagcgcttgctagtatttcacacatcgcgagagtaacagtaactaccaaaactaaaaat
gaggcctgcgcttggagagtctcttactcagctggtaaaatgataggagagccgaaacca
atagctggccgggacgggactatcatactggtcgaagatctattttacaacgtacagtcc
agactcaggtcgctgcgatcgcccggcgatgagttcgccaagatcttggattgtgttggt
cggtatgcaatcaattccaaaaatgtaggattctcttgcaaaaagtttggcgaatcgcag
tttgcgttgactgtaagatatgacgcggatgtgagagagagagtacaggcggtgtttggt
cgaggtactgcttctaatctgatcgagttgaaggttcccgaaatcgaaggtttgggagcg
tcagctagcggtcaagttagcacgctcaactttattaataaaaagtccatttctcccatt
ttttttatcaacaaccggcttgtgacgtgtgatccattacgcagggctctttatcaaact
tattcgtcgcacctggctaagggcaatagacctttcatttatctgaacgtcacgattcgc
cccgaactcgttgacgtcaatgttcatcctacaaaaagagaagttaggtttttgcatgat
gaagaaatcatagaacagatagcaagtcagttaggggatgttttgtcgaattgtgataca
tcaagatcattcaaaaccacttcaattttcacacagaagcctgtctctatcagagaaaac
ctaggtaaaccccactcccaactcatcaacaacataccagtaactccattaggcaataaa
gtcaagcgccaggaaaacaaactcgttcgcatagacgcgtctcaaacaaaaatcaccaat
tacttgagatctgcagaatacacagagaatacagaacaaagtaccccttataagcagtca
tacgaggacgacagcatacaatcttcatgtcgcgcctcagaaggcagacaacatcaggga
agctggattgcagatacaccaagcagacgagcatcaaaaacgtcgacttatactgtttcg
cgcaaaaccagagtagaggttaaccttgcaagcgtgaacatgctacgaaaggaagtagac
tccagcatgaacaaagacttgacaaatatttttgcaaatcttacttacattgggctcgct
gacgagcagaggaggctggcttgcatacagcatgatcttagactgttcttggtcgactat
ggttccatctgtagcgaacttttttatcaggtcggcttaacagatttcgcgaacttcggc
aagatattcttgattaatgaggatgaaagtgccggttcccaagaggaagggttgtctgtt
ggctcccttttacaagaggttgtgagttcaagaggaggttcatcaaccgagctcatacgg
ccattatgggacatgcgtgaaatgctcgaggagtatttctccatagaattgtatggcggg
gacacgcacgtggagaatacaaagataaaaagtcttccacttcttatcaaaggatacatc
ccaccactttcaaagctgccgcacttcctttatcgacttctcaccaaaattgactggtcc
gatgagatgaaatgtctgcaaggcattctaaaacaaattgcgctgctttacgtccccgag
atgatcgaacagattgacccggaagactcttcaataaaggaggaggagcgcattaggtac
cttactgatactgagaacatggagaaaatcttagaagaaacaatttttccctgcattaag
aagcgtttattggcgcccagagatttgatggggaatgttgttgaagtcgcaaacttgcca
ggcctctataggatattcgagcgatgctga
DBGET
integrated database retrieval system
