Lachancea thermotolerans: KLTH0F11880g
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Entry
KLTH0F11880g CDS
T01117
Name
(RefSeq) CCR4-NOT core subunit NOT5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
lth
Lachancea thermotolerans
Pathway
lth03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KLTH0F11880g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0F11880g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
KLTH0F11880g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
KLTH0F11880g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Tea_helical
Motif
Other DBs
NCBI-GeneID:
8292928
NCBI-ProteinID:
XP_002554714
UniProt:
C5DLC6
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Position
F:complement(1000583..1002274)
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AA seq
563 aa
AA seq
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MSQRKLQQDIEKLLKKVKEGLQDFEDVYDKFQSTDASNTSYREKLESDLKREIKKLQKHR
DQIKTWLSKEDVKDKQQVLMENRRLIESGMERFKSVEKMMKTKQFSTEALTNPDIIKDPR
ELKKRDQFLFVQDCLEELQKQLESYEAQDNEEQCERHAFHIANLENILKQLQNNELEPDT
VEEYQEDIQYYVENNDDPDFIEYDTIYEDMDCEIQPGEEAKDLEPSSKPVKASKAERSPR
KKGSSGAALPPSASNSLTDNQNSPSAVASPSTSSTGLASLPAKRDTPPQSQAPGQSQGQN
SNEEQHPDHNSDLTPQQNSSLDQDQNRSQNQNQQQQNVNQTQPQTEAQPPRDMSKQIDEM
LAQDRSQNSAFQNPLFHPGLDYWLESKRTLLQPYETMPAEMASQLESSLLNCPDSLDADT
PHLYHNVLSLPHPTSIFFPNEPIRLVSNEPVDPTKTHPKHNDIYSRTSLARIMSKFDLDT
LFFIFYHYQGTYEQFLSARELSIRGWQFNKVNRCWFYKEVEKLPPGMEQSEEISWRYFDY
QKSWLARRCGAEFVYREEEFERI
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaaaggaaacttcaacaagacatagaaaagctgctgaaaaaggtgaaagaagga
cttcaagacttcgaagatgtgtacgataagtttcagagcaccgatgcttccaacacgtcg
taccgcgagaaactggaaagtgacctcaagcgagagatcaaaaagctgcaaaaacacaga
gaccagataaaaacttggctcagtaaggaagatgtcaaggataagcagcaggtacttatg
gaaaatcgtcgtctgatagagtcaggcatggaacgttttaagtctgttgagaagatgatg
aaaacaaagcagttttcaacagaggctctcacgaatccagacattattaaagaccctcgc
gagctcaagaaacgcgatcaatttctgtttgtgcaggattgcctcgaagaacttcagaaa
cagttggagtcatacgaagcccaagataacgaggagcagtgcgaaaggcacgctttccac
atcgcgaacttggagaacattttgaagcagctccaaaataatgaactggaaccagacaca
gtggaagagtaccaagaagatattcagtattatgttgaaaacaacgacgatccagacttc
atcgagtacgataccatctacgaagacatggactgtgagatacagcctggcgaagaggca
aaagacttagaaccatcttctaagcctgtgaaagcaagtaaagccgagcggtctcccaga
aaaaaaggatcgtcgggcgccgcgctacctccatctgcatctaactctctgacagacaac
cagaactcacctagtgctgttgcatcgccgtcgacatctagtacaggcctagcttcgctc
ccagcaaaaagggacacgcctccccaatctcaggctccaggccaatcccagggccagaac
tctaacgaggaacagcatccagatcacaattccgacttaactccgcagcagaactcaagc
ctagatcaagaccaaaacagatcccaaaaccaaaaccaacaacagcaaaacgtaaaccaa
acccaaccacaaactgaggcgcaaccaccgagagacatgtctaagcagattgatgagatg
ctggcgcaggaccgtagtcaaaactcggcatttcaaaaccctcttttccatcctggcttg
gactactggctcgagagcaaacgcactctgcttcaaccatacgaaactatgcctgctgaa
atggcctcgcagctcgaatcttcactgctgaattgtccagactcgctagatgccgacacc
ccgcacctgtatcataatgtgctctcactaccccatcctacgtcgatatttttccctaac
gaaccgatcagactggtttcaaatgaacctgttgatcccacaaagactcacccgaagcat
aatgacatctattcaagaacttctcttgcacgcataatgtccaagttcgatcttgacact
ctctttttcatcttttaccactatcagggaacctatgaacagttcctatcggccagagaa
ctgagtattcgcggttggcagttcaataaagtgaaccgctgctggttttacaaagaagtt
gaaaaactccctcccggaatggagcaatctgaagagatctcttggagatattttgactac
caaaaatcctggctcgctagacggtgtggagcggagtttgtgtatcgtgaggaagagttt
gagagaatatag
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