Lachancea thermotolerans: KLTH0F17336g
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Entry
KLTH0F17336g CDS
T01117
Name
(RefSeq) rRNA-binding endoribonuclease
KO
K11883
RNA-binding protein NOB1
Organism
lth
Lachancea thermotolerans
Pathway
lth03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
KLTH0F17336g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lth03009
]
KLTH0F17336g
03051 Proteasome [BR:
lth03051
]
KLTH0F17336g
Ribosome biogenesis [BR:
lth03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
KLTH0F17336g
Proteasome [BR:
lth03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
KLTH0F17336g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIN_6
Zn_ribbon_NOB1
LolA_3
Zn_ribbon_19
Tau95_N
SANT_DAMP1_like
HVO_2753_ZBP
Zn_ribbon_12
Piezo_TM1-24
Motif
Other DBs
NCBI-GeneID:
8293172
NCBI-ProteinID:
XP_002554938
UniProt:
C5DJL2
LinkDB
All DBs
Position
F:complement(1404139..1405536)
Genome browser
AA seq
465 aa
AA seq
DB search
MSAETAAHVNSLVLDATPLITQSYSHYQSYAKSFFTTPTVFQEIKDEQARKNLELWRSLG
TLELRHPKAESIKRVKDFAMLTGDYAVLSANDIHIIALTYELEVELNGGDWRLRTRPGDD
LAETAEKEADQEKEVLAKSKKKRRRGGKKQREKRQQQEQEQEQEQETQGQEQEGAGLAQD
QASEPDAQEPHEDEIANSLENLEMADAQSSQEAADGSYFEDDDDGEWINPENLTEVMIKD
SGEDTKGTNVREDSHETTSENHLKLPQNQVALATGDFAVQNVALQMNLNLMNFLSGLKIR
KLRNYMLRCHACFKMLPLPKDGTPKHFCPSCGGYSTLMRCAVSVDAATGDVTPHLKANFQ
WNNRGNRYSIASPLSKNSQKRFGKKGFVHSKHAQTTDLLREDQKEYEKALKQEDWTRRHN
EKILNDWIGGGSAENFISPFAISGLKHHSVKVGRGRHANSSRKKK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtcagctgaaactgccgcacacgtcaatagcttagtgctggatgcgacaccgctgatc
acacagtcgtattcccactaccaaagctatgccaagtcatttttcaccacacctacagtt
ttccaggaaatcaaggatgagcaagccaggaagaacctggaattatggcggagtctgggg
acgctagaactgcgtcaccctaaagctgaatcgatcaagagggtgaaggacttcgcgatg
cttactggtgactacgcagttttgagcgccaacgacattcacatcatcgcactgacatat
gagctggaagttgagctgaacggcggtgactggagactccgtacacgccctggtgatgat
cttgctgaaacagctgaaaaggaggccgatcaggagaaggaggtgctagctaaaagcaaa
aagaagcgtagaagaggcggtaagaagcagcgtgaaaagaggcaacagcaggagcaggag
caggagcaggagcaggagacacaaggacaggagcaggaaggtgcgggcctagcgcaagac
caggctagtgagcccgacgcccaagagccccacgaagacgaaatcgcaaattcactagag
aatttggagatggctgatgcgcagtcatcccaagaagccgcagatggctcttacttcgaa
gatgatgacgacggagagtggatcaatccagaaaaccttactgaggttatgataaaagac
agcggcgaagacaccaaaggaacaaacgtgcgcgaggattcccacgagacgacatccgag
aaccatctaaaactccctcagaaccaagtggcccttgccactggtgattttgcagtgcaa
aacgtggcgttgcagatgaatctgaacctcatgaacttcctgtcgggtctgaagatcaga
aagctccggaactacatgctcagatgtcatgcctgcttcaaaatgttgcccctccccaag
gacggcactcccaagcacttttgcccctcatgcggtggctactcaactcttatgcgctgt
gccgtatccgtagacgcggcgacaggcgacgtcacaccgcacttgaaggcaaacttccaa
tggaacaatcgcggaaaccgctattcgatagcaagtcctctatcaaagaactcacaaaaa
cgtttcggaaagaaaggtttcgtccacagtaagcacgcccaaacaaccgacctactgaga
gaagaccaaaaagagtacgaaaaagccctcaaacaggaagattggacccgcagacacaac
gagaagatcctaaatgactggataggaggtggttcggcagagaacttcatatcgccattc
gcgatttcgggcctgaaacatcactccgtcaaggttggtagaggccgccacgcaaacagt
tctaggaagaagaaataa
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