KEGG   Lachancea thermotolerans: KLTH0F19294g
Entry
KLTH0F19294g      CDS       T01117                                 
Name
(RefSeq) cleavage polyadenylation factor subunit PFS2
  KO
K15542  polyadenylation factor subunit 2
Organism
lth  Lachancea thermotolerans
Pathway
lth03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    KLTH0F19294g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0F19294g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     KLTH0F19294g
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st WD40_Gbeta WDR55 Beta-prop_WDR3_2nd EIF3I Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_EML Beta-prop_Aladin ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C DSE1_N Beta-prop_RIG_2nd Beta-prop_WDR19_1st ASA1 WDR90_beta-prop_4th Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_NOL10_N Beta-prop_WDR75_1st CFAP251_N WD40_MABP1-WDR62_1st Beta-prop_SCAP PAC11 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 WD_LRWD1 Beta-prop_VPS8 Beta-prop_ACSF4 PEP5_VPS11_N Beta-prop_SPT8 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 8293261
NCBI-ProteinID: XP_002555025
UniProt: C5DJU9
LinkDB
Position
F:complement(1560167..1561522)
AA seq 451 aa
MNGLNGMDAQGADKKYVTQRRTVDMSSPYERLYYLKRHGLSLPYIEPETSYTTNILPADA
YAFNRRVVNTPTKFTHLSSNKVKHVIPALEWTPEGRRLVVATYSGEFSLWNGSTFNFESI
MQAHDSAVSVMTYSHAGDWLISGDSDGTIKIWQPNFNMVKVLDEAHTQCIRGISFSGTDS
KFVTCSDDNILKIWNFSNGQQESTLTGHHWDVRSCDWHPTMGLIASGSKDNLIKLWDPRS
GQCISTILGCKHTIISTKFQPTKGNMLAVISKDKSCRVFDIRQNMKELAVYRDESDYMSL
TWHPINESIFTVGCYDGSMKHFDLMQEPQDSSSGCFHNIPYAHDKCITSLAYNPVGHILA
SASKDRTIRFWTRSRPLDPNAFDDPTYNNKKVNAWYFGINNNINAIRPKTEDGIALPPAN
DTSAGAAGGPSTIPGLRLQSPPTSGLPGLNF
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgaatggcctcaacggcatggatgcacagggcgcagataagaaatatgttacgcagcgc
cgcacagtggatatgagctcgccttatgaaagactgtactacctcaagaggcacgggctt
tcgctgccgtacattgaaccggaaaccagctacacgacaaacatcctccccgccgatgcg
tacgcgtttaacagaagagttgtgaatacacctacgaagttcacgcatctcagctcaaac
aaagtcaagcacgttataccggcgctagaatggaccccggagggacgcaggctggtagtg
gcaacgtacagcggagagttctcactttggaatggctctacattcaacttcgaaagcatt
atgcaggcgcatgacagcgcggtgtcagtcatgacttattcgcacgcaggtgactggctc
ataagtggcgactctgatggcacaattaagatatggcaaccaaactttaatatggtcaaa
gttctcgatgaggctcacacgcagtgcatacgcgggatatcatttagcgggacagattcc
aagtttgtgacatgctcagatgacaacattttgaaaatctggaacttcagcaacggtcaa
caagaaagtacgcttacaggccatcattgggatgtccgaagctgcgattggcatcctacg
atgggtctgattgcatctggatccaaggataacttaataaaactttgggaccctcgttca
gggcagtgcatttctactatccttggctgcaaacacacaataataagcaccaagtttcag
ccgacaaaggggaatatgttagcggtgatttcaaaagacaagagttgccgagtttttgat
attaggcagaatatgaaagaacttgcggtataccgcgatgaatcagactatatgtcacta
acatggcaccccattaatgaatcaatttttactgtcggctgctacgatgggtcaatgaag
cattttgaccttatgcaggaaccacaggactcctcctcgggctgtttccacaacataccg
tatgcccacgacaaatgtataacctctttggcctacaatccagttgggcatatacttgcc
agtgcatccaaagacagaactatcagattctggacgcgatccaggcccctcgatcctaat
gcatttgacgacccaacctataacaacaaaaaggtcaacgcttggtattttggaatcaat
aataatatcaatgccataagacccaaaactgaagacggtattgctttgccacctgctaat
gatacttctgccggcgctgctggtggcccaagcactattccaggactgcggttgcaatca
ccgccaacttctggattgccaggtctgaacttctag

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