Lachancea thermotolerans: KLTH0F19338g
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Entry
KLTH0F19338g CDS
T01117
Name
(RefSeq) KLTH0F19338p
KO
K20408
SEA/GATOR complex protein SEA2/WDR24
Organism
lth
Lachancea thermotolerans
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lth04131
]
KLTH0F19338g
Membrane trafficking [BR:
lth04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
KLTH0F19338g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
zf-RING_16
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_EML
WDR55
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR75_1st
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_RFWD3
zf-RING_2
Beta-prop_WDR35_TULP_N
Beta-prop_TEP1_C
VHS
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
8293263
NCBI-ProteinID:
XP_002555027
UniProt:
C5DJV1
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All DBs
Position
F:1564555..1568427
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AA seq
1290 aa
AA seq
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MSRSQSPSLNDGLSTSNSRHSSSHSRFSLHKAFPQLSGNASFNGTSPKTKLPSRFSGGSN
PPYMDSLKEQESSSSSSRSNFRRANYVNPGRIRSSGLKYSLQAPKELSSIDKINDPASRS
IVISGKNHLGLYRFREDYGKLELTLDLFNIDQKAASLRTTTRKTSTISDVKAGFHNYKNY
VAICGTSTSVSIYDINRANLVDGPASMVLSKHTRSINSVDFNMAQTSLLISGSQDGCIKV
WDLRSSQGRKNKSDLTINSGSDSVRDVKWMPTYDFPNNDDVVAGPSNRSHRFASIHDSGL
LLTYDLRQPSQAEKRINAHSGPGLCLSWHPTLDYIMTGGRDGKCCLWNMGSKPLNPASFQ
NIHHNSSFSTSAASSFTQGFSANSVTNFINSPEAVVNTAHPLTKLKFRPSAIPEVFDSVI
ALSSLGENSDVSLYSLSRSYIPKNVLTTNSPSCGFVWWNENLIFNIDKQNMVTGWDLGKE
PTVLDNLPKNKIAWRDIEGDGLVFLAQDKGGYESGGPDGMSVSTETRNFSQSRLSTTTMS
NLFPSHTMRQNSSVSSFPALNTHSNSGANLGDRPSLPRTVTSYSKGAYTQTYGSYNTHSS
HHNSAASASASSIATELGSEHVLSPRMISLDLPHILNSIRSAKIENYAKKPSRPGSAAFK
DSPVEVFKFLSRELKFSYMHDRNFNKPENLTDQDDLAQSVDDNDLKSHLITRFGFSENNT
WTKFIKKSNSPEKDAAVENGTKVNEASIEKVTNSPNDTGSDELSSISKLSTEPKKSDLAE
RNITAIRQRVKHFIELVSMCDHNAEIYLYIDDLSNFKIWMMMRDSLLWELKQITDSLETD
GGSLLSESLLVNPDVTRHSNGARKQSMASDYSSFSTSEVGSTTGVQALPEFRGPHSLSTP
PRATTSFGAKEPSSLKKRESTIDENLSETEIEAKGLPKEDIKNLRNQISKHQIGDEVAIE
DEEEDKFEEKSSAGTDASNKNIPIIPSERKVSFVDQFINSMRSPKTLHGDFETDGSRMAN
SASTKRSSQPSFSSSLAGLITRRLSDQSPKTKPKDLIYSKSSGSIAKNSSDLFDFQNVEG
NNSPRVLTQKSKISMLLKGLKKSETAPPWDASRLIKKIFEQSVATGNVLLTISIILLFQT
TFKVTSTTVVKNALSEFINILHKYELFEIAANLLKFCPWDDILEAGNGQCTVRIYCERCK
KLLVNESSKEKFTEEWKRTGRQEVMKRFGYWYCDNCSKRNTLCVLCEQPLKKLTFCVLNC
GHEGHPECFKKWFMNEEMSECPSGCSGFLL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaagccaatctccctcccttaatgacggacttagtacatccaacagcaggcat
tcaagctcccattccagattctctctgcacaaggcgtttccacaactgagtgggaatgcg
agttttaatggcacttctccgaagaccaaattgccgtctaggttttcagggggtagcaac
cctccatatatggatagcttgaaagagcaagagagctcttccagctcaagtagatcgaac
tttcgtcgggctaattacgtgaatcccggccgcatcaggtcctctggtttgaagtactcc
ttgcaagcaccaaaagagctttctagtatcgacaaaattaacgatcccgctagcaggtcg
attgttatttcaggcaaaaaccacctaggactttaccgttttcgcgaagattatggcaag
ctggagttgacattggacctttttaatattgatcaaaaagcagcgagtttgagaacaact
accagaaaaactagtaccatatcagatgttaaggcaggcttccacaactacaaaaactac
gttgctatatgtggaacctcgacttctgtttcaatatatgacatcaacagggcaaactta
gtcgacggacccgcttccatggttctctcaaagcataccagatcgatcaacagtgtcgac
tttaatatggcacaaacaagtttgctaataagtggaagccaggacggctgtataaaagtt
tgggatcttcgttcgagccaaggtcgtaaaaacaagagcgacttaacgataaacagcggg
tctgactcagtacgcgatgttaaatggatgcctacgtatgacttccctaacaacgatgac
gttgtggccgggcccagcaatagaagtcatagatttgcttctatccatgactcggggcta
ctcttgacttacgacctgagacagccgtctcaagctgaaaaaaggataaatgctcattca
gggccggggctctgcctcagttggcatcccaccttagattatattatgacagggggccga
gacggcaaatgctgcctctggaatatgggcagcaaacccctgaatcccgcaagttttcaa
aatattcatcataacagttcattcagcacgtcggctgcgagctctttcactcaaggcttt
tccgccaactcagttacaaatttcatcaactcacctgaagcagttgttaacaccgcacac
cctttaaccaagctgaagttcagaccttctgcaattccagaagtatttgattccgtaatt
gctctttcgtcactgggtgaaaattcagatgtttctctttattcactctcaaggtcatat
atcccgaaaaatgtacttacaactaactcaccttcatgcggctttgtttggtggaatgag
aaccttatttttaacattgacaaacagaatatggtcactggctgggatttaggaaaagaa
cctacagttttggataatctgccaaagaataaaatagcgtggagggacattgaaggtgat
gggctggtatttctggcgcaagacaaaggcgggtatgagtctggcgggccagatggcatg
tctgtgtccaccgagactagaaatttttcgcaaagtagactaagcacgacaacaatgagc
aatttattccctagtcatacgatgagacagaattcaagcgtatcttcatttccagcgctc
aatacgcactcgaattctggagcgaacctcggtgatagaccctcccttccacgtacggtc
acgtcatatagcaagggcgcctatactcaaacatatgggtcctataatacgcacagctcg
catcataactcagcagcctctgccagtgcttcatcaattgcaacggaattgggctcagag
cacgttttgtcgccaaggatgatctccttggatctaccacacattcttaatagcatcaga
agtgccaaaattgaaaactatgccaagaagcccagtcgccctggttctgcagctttcaag
gactcccctgtcgaagtcttcaagttcctttcgcgtgaactcaagttttcgtatatgcac
gatcgaaatttcaacaaaccagagaatctcactgatcaagatgaccttgctcaaagcgtg
gacgacaatgatttgaagtcacaccttattacgcgatttggattttctgagaacaacacc
tggactaaattcatcaagaaaagtaactccccagagaaggatgctgccgttgaaaatgga
actaaagtaaacgaagccagtatcgagaaggttactaactctccaaatgatacggggtca
gatgagctcagcagcatatcgaagctttcgactgaacccaaaaaatcagatttagctgag
cgcaacattacggctattcggcaaagggtaaagcattttatagaacttgtttccatgtgt
gatcataacgccgagatatacttgtacattgatgacttatccaatttcaaaatatggatg
atgatgagagattctctactatgggagctcaaacagataacagacagcctcgaaactgat
ggaggaagccttctttcggaatcattgctcgttaaccccgatgtcacgcgtcactctaac
ggggctcgcaagcaatctatggcctcggattatagtagcttcagcacaagtgaagttggg
tctacgactggagttcaagctttgcccgaattccgcggccctcattccttaagtacacct
cccagagccaccacgagttttggggcgaaagaaccatcgtccttgaaaaaaagagagtcc
actattgatgaaaacttgagtgaaactgaaatcgaagctaagggcttgcccaaagaggac
attaaaaatttaaggaaccaaatttctaagcaccaaattggcgacgaggttgccattgaa
gacgaggaggaggacaaatttgaggaaaaaagcagtgccggaactgatgcttctaacaaa
aatattccaattattccctctgaaagaaaggtgtcttttgtcgatcaatttatcaatagt
atgcgctctcctaaaactcttcacggtgattttgagaccgacgggagcagaatggctaat
tctgcgagcactaaaagatcatcacaacccagtttcagttcatcacttgctggtttgata
actagaaggctatccgatcagtctccaaaaaccaagcccaaagacttgatttattcaaag
agttccggaagcattgcaaaaaacagcagcgatttgtttgatttccaaaatgttgaaggt
aacaattcaccaagggtactgactcaaaaatcgaaaataagcatgctattgaagggttta
aagaaaagcgagacagcaccgccttgggatgcttctaggcttataaaaaagatttttgaa
caatctgttgctaccgggaatgtgcttcttactattagcattatactgctgtttcaaact
acttttaaggttactagcaccacagtggtgaaaaacgcactttcagaatttatcaatatt
ctgcataagtacgagctatttgaaatagcggcaaatttattgaagttttgtccttgggac
gacatacttgaagctggaaatggccaatgcaccgttagaatttactgcgagcgctgtaag
aagctcttggtaaacgaatcctcaaaagaaaaatttactgaagagtggaagcgcacaggt
cggcaggaagtgatgaaaaggtttggatattggtattgcgacaattgctcgaaacggaat
acgctttgtgttttgtgtgaacagcctttgaaaaagctcacgttttgcgtactgaattgt
ggtcatgaaggccatcccgagtgcttcaaaaagtggttcatgaacgaagagatgagcgaa
tgtcctagtggatgttctggtttccttttgtaa
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