Lachancea thermotolerans: KLTH0G02970g
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Entry
KLTH0G02970g CDS
T01117
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
lth
Lachancea thermotolerans
Pathway
lth03020
RNA polymerase
lth03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KLTH0G02970g
09124 Replication and repair
03420 Nucleotide excision repair
KLTH0G02970g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0G02970g
03400 DNA repair and recombination proteins [BR:
lth03400
]
KLTH0G02970g
Enzymes [BR:
lth01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KLTH0G02970g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
KLTH0G02970g
DNA repair and recombination proteins [BR:
lth03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
KLTH0G02970g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
MRNIP
Motif
Other DBs
NCBI-GeneID:
8293431
NCBI-ProteinID:
XP_002555168
UniProt:
C5DLS0
LinkDB
All DBs
Position
G:complement(229131..232793)
Genome browser
AA seq
1220 aa
AA seq
DB search
MSTEEFYEEDPYGYEDDEASITAEDSWTVISAFFREKGLVSQQLDSFNQFINYTIQDSIV
EDSTLILEQLAQHTTEADNISRKYEISFGKIYLAKPSMTESDGVSHAMYPQEARLRNLTY
ASGLFVEIRKRTYEAVDIPGRDLKYEVIDEESEMSDESKIFIGRVPIMLRSKYCLLDELT
ESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKSAPSPISHIAEIRSALE
KGSRFISTLQVKLYGREGSTNRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEHICYDV
NDWQMLELLKPCVEEGFVIQDRETALDFIGRRGTALGIKKEKRIQYAKDILQKEFLPHIT
QLEGFESRKAFFLGYMINRLLLCALDRKDQDDRDHFGKKRLDLAGPLLAQLFKTLFRKLT
RDILRFMQRSVEEAKDFNLKLAVKATTITAGLKYALATGNWGEQKKAMTSRAGVSQVLNR
YTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLSLMSCI
SVGTDPLPIITFLNEWGMEPLEDYVPHQSPDATRVFVNGVWHGIHRNPAKLVDTIRKLRR
KGDVTSEVSIVRDIREKELKIFTDAGRVYRPLFIVDENEETGVKELKLRKGHIRKLMMTE
YQDIEGGFEEEDINYTWSSLLNEGLVEYIDAEEEETILIAMQHEDLDPTIEAADPEEELD
PAKRIKAIHHSSTFTHCEIHPSMILGVAASIIPFPDHNQSPRNTYQSAMGKQAMGVFLTN
YSVRMDTMANILYYPQKPLGTTRSMEYLKFRELPAGQNAIVAIACYSGYNQEDSMIMNQS
SIDRGLFRSLFFRSYMDQEKRIGMSITESFEKPQRTNTLRMKHGTYDKLDDDGLIAPGVR
VSGDDMIIGKTTPIPPDAEELGQRTAFHSKRDASTPLRSTENGIVDQVLITTNQEGLKFV
KVRVRTTKVPQIGDKFASRHGQKGTIGITYRREDMPFTAEGVVPDLIINPHAIPSRMTVA
HLIECLLSKVAALSGNEGDASPFTDITVDGISRLLREHGYQSRGFEVMYNGHTGKKLMAQ
IFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAA
AFLKERLMEASDAFRVHICGVCGLMTVVAKLKHNQFECRGCKNKIDIYQIHIPYAAKLLF
QELMAMNIAPRLYTDRSRDF
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgaggagttttatgaggaagacccatacggatacgaggatgatgaggcttca
atcacggcggaagattcctggactgtgatatctgcatttttccgtgagaagggtctagtg
tcacagcagctggactctttcaaccagttcatcaactacacgatccaggactcaattgtg
gaggactcgacgctgattttggaacagctggcgcagcatacaacggaggctgacaacatc
agccgcaagtatgaaatcagcttcggcaaaatctatctggcaaagccctcgatgacagag
tccgatggcgtctcacacgcaatgtacccacaagaggcgcgtttgcgtaacctgacgtac
gcgtccggtctgttcgtggagatccgcaagcggacctatgaagccgtggacattcctggt
cgtgacctcaaatatgaggtaattgacgaggagagcgagatgtcggatgaaagcaagatc
ttcatcggacgtgtacccatcatgctgcgttccaaatactgcctactggacgagctgaca
gagagcgatctatacaagctgaaagaatgcccgtttgacatgggtggttacttcatcatc
aacggttccgaaaaggtcctgattgctcaggaacgttccgcaggtaacatcgtccaggtc
tttaaaaagtccgcgccttcgcccatttcacatatcgcagagatacggtccgcgctggaa
aaagggtcgagattcatcagtacgcttcaagtcaagctgtatggacgtgagggtagcact
aaccgtaccatcaaagccactcttccctacatcaagcaagacattcccatcgttatcata
ttcagagcccttggcatcattcccgatggtgaaatcctagagcatatctgttacgacgtc
aatgactggcaaatgctagaactcctgaagccgtgtgttgaggagggttttgtcattcag
gatagagaaaccgcgttagactttattggtcgtcgtggtaccgctttgggaatcaagaaa
gaaaagagaattcagtacgctaaagacattttgcaaaaggagttcctgcctcacattact
cagctcgaaggttttgaaagtagaaaagcatttttcctaggttacatgatcaacaggttg
ttgctgtgtgccctcgaccgtaaggatcaagatgaccgtgatcattttggtaagaagaga
ttagatttggctggtccactattagcgcagcttttcaagaccttgttcagaaaacttacg
agagatattcttcggtttatgcaaagatcggtggaagaggccaaagacttcaatttgaag
ttggccgtcaaagcaactactattactgctggtttgaaatacgcattagccaccggtaac
tggggtgaacaaaagaaggccatgacctctagagcaggtgtttctcaagttttaaacaga
tacacttattcttctactctgtcgcatttaagaagaaccaacacaccaatcggtcgtgat
ggtaaacttgccaagcctcgtcaattgcataacacacattggggtctagtgtgtcccgcg
gaaacaccagaaggtcaagcatgtggtctggtgaaaaatttgtcgctgatgtcctgcatt
tctgtcggcacagatccattgccaattataacctttttgaatgagtggggtatggaaccg
ctggaggattacgttccacatcaatcccctgacgctactagagtctttgtcaatggtgtg
tggcatggtatccacagaaacccagctaagcttgttgacacaattagaaagctgagaaga
aaaggtgatgttacttctgaagtttccatcgtcagagatattcgtgaaaaggaactcaaa
atctttacagacgccggtagagtttacagaccactgtttatcgttgatgaaaatgaggaa
actggagtgaaagaattgaagctgaggaaaggccacatcagaaaactgatgatgactgag
tatcaggatatcgagggtggctttgaagaagaagacattaactatacgtggtcctcactg
ttgaatgaaggcttggttgagtacattgatgctgaagaagaagaaacaattttgattgcc
atgcaacacgaagatcttgatccaactattgaggcggctgatccagaggaggaacttgat
cctgccaaacgtatcaaggctattcatcactcaagcacattcacgcattgtgaaattcac
ccatcgatgattcttggtgtcgctgcctctattattcctttccctgatcacaaccagtct
cctcgtaacacataccaatctgctatgggtaaacaagctatgggtgtattcttgaccaat
tacagtgtccgtatggatactatggcaaatattctgtactatcctcagaagccccttggt
acaactcgttcaatggagtacttgaagttcagagagctgcccgccggtcagaatgcgatt
gtcgctattgcatgttattctggttacaaccaggaagattccatgattatgaatcaatcc
tcgatcgacagaggtctcttccggtcattgtttttcagatcttacatggaccaagagaaa
cgtattggtatgtccatcacagaatcctttgaaaagcctcagcggacaaataccttacgg
atgaagcacggaacttatgacaagctagatgatgacgggttgattgctcctggtgttaga
gtatctggtgatgatatgattatcggtaaaacaacacccattcctcccgatgccgaagag
ttgggtcaaagaactgcattccactctaaacgtgacgcttcaacacctcttagaagtact
gaaaacggtattgttgaccaggtgttgattaccaccaatcaagaaggtttgaaattcgtg
aaagtcagagtgagaacaactaaagttccacagattggtgataaattcgcctctagacac
ggtcaaaaaggtaccattggtatcacttaccgtagagaagatatgcctttcactgcggaa
ggtgttgtacctgatttgatcatcaatcctcatgccattccatcgcgtatgacagtcgca
catttgattgaatgtcttctgagtaaggtcgcggcactttcaggtaatgagggtgacgct
tctccgttcactgacattactgtggatggtatttctaggttactgcgtgagcacggctat
cagtctcgtggctttgaagtcatgtacaatggtcatacgggtaaaaagctgatggctcaa
atattcttcgggccaacatattaccagcgtctgagacatatggtggatgacaagatccac
gcaagagcacgtggtccggtacaagtcctaacaagacagccagtcgagggtagatcaaga
gacggtggtttgagatttggtgaaatggagagagactgtatgattgcacatggtgctgcc
gcatttttgaaagaaagacttatggaagcctctgacgcatttagagttcacatctgtggt
gtttgcggtttgatgactgtagttgccaagctcaaacacaaccaattcgaatgccgcggc
tgcaaaaataagattgacatatatcagatccacattccttacgctgctaagcttctgttc
caagagctgatggcgatgaacatcgcgccgcgtctatatactgatcgctctagggatttc
tag
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integrated database retrieval system
