Lachancea thermotolerans: KLTH0G04004g
Help
Entry
KLTH0G04004g CDS
T01117
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
lth
Lachancea thermotolerans
Pathway
lth03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lth00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
KLTH0G04004g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lth03021
]
KLTH0G04004g
03019 Messenger RNA biogenesis [BR:
lth03019
]
KLTH0G04004g
Transcription machinery [BR:
lth03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
KLTH0G04004g
RNA polymerase I system
KLTH0G04004g
Messenger RNA biogenesis [BR:
lth03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
KLTH0G04004g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5_N
Spt5-NGN
KOW5_SPT5
KOW
KOW2_Spt5
KOW4_SPT5
KOWx_SPT5
KOW1_SPT5
DUF3912
DUF7234
DUF4438
KOW6_SPT5
Motif
Other DBs
NCBI-GeneID:
8293476
NCBI-ProteinID:
XP_002555210
UniProt:
C5DLW2
LinkDB
All DBs
Position
G:complement(316665..319922)
Genome browser
AA seq
1085 aa
AA seq
DB search
MAEETNQQPSLATEIGNVENPNVKDHQQETGEDQSQLENKLPLTDASTAENREAAQSALG
TGQQQVDTDEPKIETNEPSNDEARMSNGETAENAGQQVAESAEQPDTKASEQESSENAES
QTGDKKRPRESEDEGSSAATDNQESTGPESKALEDEQAAGEEEGELDDDDDDEDDDDDED
DDDEAGPRKKQRRERNRFLDIEAEVSDDEEDEEDDEESELVREGFITRGDEEEEETAGPT
GRDDRLHRQLDQNLNKSSEEDAQKLAKELRERYGRSSSKQYRAAAQDGYVPQRFLLPSVD
TATIWGVRCRPGREKEIVRKLLKKKFNLDKSMGNKKLKIMSIFQRDNYSGRIYIEAPKQS
VIEKFTTGVPDIYPAQKLLIPVQELPLLLKPDKSDDVRLEEGSYVRIKRGIYKGDLAVVD
QISENNLEVLLKIVPRLDYGKNDEIDADTNTRKQKRPTFAQRPPPQLFNPTMALRMDQAN
LYKRDDRHFTYRNDDYVDGYLFKSFRIQYLETKNIQPSVEELARFGSKEGNLDLTTISQT
IKKAQAAKVTFQIGDRVEVLSGEQKGSKGFVTRTSMDIIAVNLPQLGMKALEFPISSLRK
IFEAGDHVTVVGGDHQGDAGLVLAVKNGQVTFVSDQTRANLTISANNLSKSMDSTPTSSE
YALHDIVELSAKNVACVIQAGHDIFKILDDTGKVSTITKGSILKKINTARSRLTTVDNKG
REIKIGDTVVEKVGARREGQVLYIQTQQIFIVSKKITENAGVFVVNPMNVEAVASKDNLI
AGVGSMDLSRMNPDVVAKMRPPQQSAQQASVGRDVALGKTVRIRSAGYKGQLGIVKDVNG
EKATIELHSKNKHITMDKRKLMYYNKEGGDGITYDELVNRRGRTPNARIGPSYVSAPRNM
ATGGMPIGAGGPGSSALSGGMTPGWNSFDGGKTPAVNSGGQGGASAWGGASTWGGQGGAS
TWGGAGQGGGASAWGGQGAGATSTWGGASAWGNKSSWGGASTWASGGDNNGGVSTWGGDK
SSHGGGSVWGNRDGGTSTWGGGTSREANREGGNSTWRNENSGNKSAWGDQGNVSSYGGNS
TWGGR
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagaaaccaatcaacagccgagcctggcaacagagatcggaaatgttgaaaac
ccaaacgtcaaagaccaccagcaagagacaggggaggaccagtcacaactcgaaaacaaa
ttgcctttgacagacgctagcacagccgagaaccgcgaggctgcacaaagcgccctagga
actgggcaacagcaagtcgacacagatgagcccaaaatagaaacgaatgaacctagcaat
gacgaagcgagaatgtccaatggagaaacagccgaaaacgcgggtcagcaagtagcagaa
agcgcagaacagccagacacaaaggctagcgagcaagaaagctcagaaaacgcagagtca
caaacgggcgataaaaaaaggcctcgtgagtccgaagacgagggctctagcgcagctact
gacaaccaagaaagtacggggcccgaaagtaaagcacttgaggatgaacaagctgctggg
gaggaagaaggcgaactcgacgatgacgacgacgacgaagatgacgacgacgacgaagat
gacgatgacgaagctggtcctaggaagaagcagcgccgcgagcggaacagatttttagat
atcgaagcagaagtcagcgatgacgaagaagacgaagaggatgacgaagaatctgaacta
gttcgcgagggtttcatcactcgtggcgatgaagaagaagaagaaaccgcgggaccaact
ggtagagacgatcggctccaccggcagctcgaccagaacctgaacaagagctcagaagaa
gatgcgcaaaaacttgccaaagaattgagagagcgttacggaagaagcagctccaagcaa
tatcgtgcggcagctcaggatgggtatgtcccccaaagattcttgctgcctagtgttgac
acagctacaatttggggtgtgaggtgtagacctggaagagaaaaagagattgttagaaag
ctgctgaaaaagaagttcaatcttgacaagtctatgggaaacaaaaagttgaaaatcatg
tctatttttcagagagacaactattccggaagaatctatattgaagctcccaagcagtct
gttattgagaaattcaccacaggtgtcccagatatttatcctgctcaaaagcttctaatt
ccggttcaggagctgccgctactgttaaagccagataagtcagatgatgttagacttgaa
gagggaagttacgtgcgcattaagaggggcatttacaagggagatttggctgttgtggac
caaattagtgaaaataatttagaggttttactcaaaattgttcctcgtcttgattacggt
aagaacgacgagatcgatgccgatacgaacactagaaaacagaagagacctacttttgcc
cagaggcctccgccccagctctttaaccctacgatggctttgaggatggaccaggccaat
ctgtacaaaagagacgacaggcacttcacctacagaaatgatgactatgtcgatggttat
ttgttcaagtcctttagaattcaatacctggaaactaagaacatccagccctcggttgaa
gagttggccaggtttggtagcaaggaggggaacctagacctgaccaccatttcccaaaca
ataaagaaggcgcaagccgctaaggttactttccagataggagaccgagttgaggttctg
agcggagaacaaaaaggctccaaaggttttgtgacaagaacatcaatggacattattgca
gtgaatctgccacaacttggcatgaaagcgctagaattccctatttcctccttgcggaaa
atcttcgaagccggtgatcacgtcacagttgtaggaggtgaccatcaaggagatgcaggt
cttgtgctagcggtgaagaatggacaagtaacctttgtctctgaccaaaccagagccaac
ttgaccatttcggcaaacaacttaagcaagtccatggattcgaccccaacctcaagtgaa
tatgctctccacgacatagttgagctcagtgcgaaaaacgtggcttgtgttattcaagct
gggcacgatatcttcaaaatcctcgacgacacaggaaaggtttctacgattaccaaaggt
tctattttgaaaaaaatcaacactgcccgttcaaggctcactactgtggataataaaggc
agagaaatcaaaattggtgacacagtggtagaaaaggtcggtgcgcgtagagaaggtcaa
gtgctgtacattcaaacccagcagatctttattgtctcgaaaaagataaccgaaaatgcc
ggtgtgtttgtcgtgaatccaatgaacgtggaagctgttgcctcaaaggacaatctgata
gcgggcgttggtagcatggacctcagtaggatgaatcctgacgtggtagcgaaaatgcgc
cctcctcagcaatccgctcaacaagctagtgttggccgcgacgttgctcttgggaagact
gtaagaattcgctctgcaggctacaagggccaacttggtattgtaaaagacgtgaatggg
gaaaaagccactatcgagttacactccaaaaacaagcacattacgatggacaaacgcaag
ctgatgtactacaataaagaaggtggcgatggtatcacgtatgatgagctcgttaacagg
cgtggtaggacgccaaatgccagaattggtcccagctatgtcagtgcgccacgaaacatg
gcaacaggcggtatgcctatcggagccggcggaccaggctcttctgcattgtcaggaggc
atgacacctggctggaactcgttcgatggaggtaaaacgccagcagttaactccggaggc
caaggaggcgcttctgcctggggtggtgcatctacttggggtggccagggaggtgcgtcc
acttggggcggcgctggccaaggtggcggcgcctcagcttggggtggccaaggcgcaggt
gctacttcgacctggggcggagcatccgcgtggggaaacaaatccagctgggggggtgct
tctacatgggcctcgggaggcgataacaatggcggagtatcaacctggggcggcgacaag
tccagtcatggcggcggatccgtgtggggcaaccgcgatggcggcacctcgacatgggga
ggcggcactagcagagaggccaaccgtgagggcggtaattcgacgtggaggaatgagaat
agtggcaacaaatccgcgtggggcgaccaaggcaacgtgtcgtcttacggtggaaacagc
acgtggggcggccgctag
DBGET
integrated database retrieval system
